Query= MSMg01no280_b08.b1 MSMg01no280_b08.b1 CHROMAT_FILE:
MSMg01no280_b08.b1 PHD_FILE: MSMg01no280_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:51 2005
(239 letters)
>mm_chr14_67668284_67668922
Length = 639
Score = 443 bits (229), Expect = e-129
Identities = 238/243 (97%), Gaps = 4/243 (1%)
Strand = Plus / Plus
Query: 1 acctggtctgcagccatacttaaaattcaattccttgtttccattacacttctcaaagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctggtctgcagccatacttaaaattcaattccttgtttccattacacttctcaaagga 260
Query: 61 agttatgtttcaaataactctgtgaatgtgttcttactaaataagggatgagaagagtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttatgtttcaaataactctgtgaatgtgttcttactaaataagggatgagaagagtca 320
Query: 121 gaactgtccagcagcagaagaatgcattctgaagacagccctgccagaaacatggatgga 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 gaactgtccagcagcagaagaatgcattctgaaggcagccctgccagaaacatggatgga 380
Query: 181 tggacggacggatggatggacgga----ccaacatacagaagagtagtaacaagcttgta 236
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 tggacggacggatggatggacggatggaccaacatacagaagagtagtaacaagcttgta 440
Query: 237 aaa 239
|||
Sbjct: 441 aaa 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no280_b08.g1 MSMg01no280_b08.g1 CHROMAT_FILE:
MSMg01no280_b08.g1 PHD_FILE: MSMg01no280_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:20:51 2005
(145 letters)
>mm_chr14_67754943_67755487
Length = 545
Score = 273 bits (141), Expect = 4e-78
Identities = 144/145 (99%)
Strand = Plus / Minus
Query: 1 tctgaaaaggacaggaacggtggtgcatgcctgtgaccacagctcttcacaaatataggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tctgaaaaggacaggaacggtggtgcatgcctgtgaccacagctcttcacaaatataggc 286
Query: 61 aggggggtgggagtttgaggacaagcctgcactacagatagtttgcttggggtagggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 285 aggggggtgggagtttgaggacaagcctgcactacagatagtttgcttgaggtagggagg 226
Query: 121 gagaggggggagtgaggaaggaagg 145
|||||||||||||||||||||||||
Sbjct: 225 gagaggggggagtgaggaaggaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 545
Length adjustment: 8
Effective length of query: 137
Effective length of database: 537
Effective search space: 73569
Effective search space used: 73569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
