Query= MSMg01no292_i10.b1 MSMg01no292_i10.b1 CHROMAT_FILE:
MSMg01no292_i10.b1 PHD_FILE: MSMg01no292_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:37 2005
(316 letters)
>mm_chr14_70850298_70851013
Length = 716
Score = 578 bits (299), Expect = e-169
Identities = 308/311 (99%)
Strand = Plus / Minus
Query: 5 gaattccagaacagccagagttatatagaaagaccctgcctcaaaacaatcaaacaacta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 gaattccagaacagccagagttatatagaaagaccctgcctcaaaacaatcaaacaacta 583
Query: 65 caataacaaaacaaatggccgaccttgaagacatatacacatgagtaacattatatagat 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 582 caataacaaaacaaatggccgaccttgaagacatatacacacgagtaacattatatagat 523
Query: 125 gagcaagacaagaacaacaccaataggcttgtatttatatattttggaacacacacttaa 184
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gagcaagacaagaacgacaccaataggcttgtatttatatattttggaacacacacttaa 463
Query: 185 ttaattaaacaaagcacttgcctactattatacatgatgtcccaggtatgatcctaagat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttaattaaacaaagcacttgcctactattatacatgatgtcccaggtatgatcctaagat 403
Query: 245 tgcaagtcaaagagagaaaatacaataatataactctgctgctcacctgcacccacccca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgcaagtcaaagagagaaaatacaataatataactctgctgctcacctgcacccacccca 343
Query: 305 agcccgaaatg 315
|||| ||||||
Sbjct: 342 agcctgaaatg 332
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 716
Length adjustment: 9
Effective length of query: 307
Effective length of database: 707
Effective search space: 217049
Effective search space used: 217049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no292_i10.g1 MSMg01no292_i10.g1 CHROMAT_FILE:
MSMg01no292_i10.g1 PHD_FILE: MSMg01no292_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:27:37 2005
(632 letters)
>mm_chr14_70684565_70685597
Length = 1033
Score = 1106 bits (572), Expect = 0.0
Identities = 618/634 (97%), Gaps = 3/634 (0%)
Strand = Plus / Plus
Query: 1 aaaattcccacaacatgggaatacaggagagtattaaaagcagctggttcaggtatgaag 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 aaaattcccacaacatgggaatacaggagagtattaaaggcagctggttcaggtatgaag 260
Query: 61 agtgttttattcttctttctgccttccaagtttcatgatttgcagggttcagactacact 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agttttttattcttctttctgccttccaagtttcatgatttgcagggttcagactacact 320
Query: 121 taaaag--aaaaaaaaacataaaacctctcatgacataaaagaggaagacatgaatagaa 178
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 321 taaaagaaaaaaaaaaacataaaacctctcatgacataaaagaggaagacacgaatagaa 380
Query: 179 aaaagaaatccccaaataagaaaagaaacttgaaaatttgggggcagaggggtcaaacaa 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaagaaatccccaaataagaaaagaaacttgaaaatttgggggcagaggggtcaaacaa 440
Query: 239 aaagaacttcataactcagttctttgagttcctggttctctgctgcggataccttcagca 298
||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 441 aaagaacttcataactcagttctttgagttcctagttctctgctgcggataccagcagca 500
Query: 299 acacgcccgctcagagcctctgctctagagcttcagacacataacccccaaagcagagca 358
||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 acacgccagctcagagcctctgctctagagcttcagacacataactttcaaagcagagca 560
Query: 359 actaacggacagttagggtacactgcagatgacacttaacaacacttaatgaactagggg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actaacggacagttagggtacactgcagatgacacttaacaacacttaatgaactagggg 620
Query: 419 aactctaagaggttttaagcataaaatacgctgcagaagaaattagccaccagacagtgg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aactctaagaggttttaagcataaaatacgctgcagaagaaattagccaccagacagtgg 680
Query: 479 acagaagcccactctccatccttcaggataggattccactcccatagcccctgtattcca 538
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 681 acagaagcccactctccatccttcag-ataggattccactcccatagcccctgtatttca 739
Query: 539 gaataggtggatcttgactaggacgagggctgttttgtgtttgtttaatctcattataat 598
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 740 gaacaggtggatcttgactaggacgagggctgttttgtgtttgtttaatttcattataat 799
Query: 599 tccatcgcttcctacccttgccatttttcagctg 632
||||||||||||||||||||||||||||||||||
Sbjct: 800 tccatcgcttcctacccttgccatttttcagctg 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1033
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1023
Effective search space: 636306
Effective search space used: 636306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
