Query= MSMg01no295_n06.b1 MSMg01no295_n06.b1 CHROMAT_FILE:
MSMg01no295_n06.b1 PHD_FILE: MSMg01no295_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:52 2005
(124 letters)
>mm_chr14_80221665_80222188
Length = 524
Score = 224 bits (116), Expect = 1e-63
Identities = 122/124 (98%)
Strand = Plus / Plus
Query: 1 ataaagaggtcttcttctgccttaccaaggaattggcaaacatcttttatttgaggccag 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaagagctcttcttctgccttaccaaggaattggcaaacatcttttatttgaggccag 260
Query: 61 acagctcatctcaagtgatttactaaaaagcttctgggctgtatgttgtgaacaaatgct 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 acagctcatctcaagtgatttactaaaaagcttctgggccgtatgttgtgaacaaatgct 320
Query: 121 gtaa 124
||||
Sbjct: 321 gtaa 324
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 524
Length adjustment: 8
Effective length of query: 116
Effective length of database: 516
Effective search space: 59856
Effective search space used: 59856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no295_n06.g1 MSMg01no295_n06.g1 CHROMAT_FILE:
MSMg01no295_n06.g1 PHD_FILE: MSMg01no295_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:31:52 2005
(285 letters)
>mm_chr14_80399009_80399692
Length = 684
Score = 424 bits (219), Expect = e-123
Identities = 240/247 (97%), Gaps = 3/247 (1%)
Strand = Plus / Minus
Query: 40 actacaactttcgtctaagatgtctgaagactttctcttcagaacctgctgcccaggtca 99
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 484 actacaactttcgtctaagatatctgaagactttctcttcagaacctgctgcccaggtca 425
Query: 100 gctctggcctgttccttgccttatatccttctataccaagttctctcaacaaccctacca 159
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 424 gctctggcctgctccttgccttatatccttctataccaagttctctcaacacccctacca 365
Query: 160 agactttgttctctagaaatcca-cagaggactctgcactttgtgattctaaaggaaaag 218
||| ||||||||||||||||||| || || ||||||||||||||||||||||||||||||
Sbjct: 364 agattttgttctctagaaatccaaca-ag-actctgcactttgtgattctaaaggaaaag 307
Query: 219 aagtagcccaaccgaataagagacccagatggcccatggattattcctccaggtcagggt 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aagtagcccaaccgaataagagacccagatggcccatggattattcctccaggtcagggt 247
Query: 279 agtgctc 285
|||||||
Sbjct: 246 agtgctc 240
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 684
Length adjustment: 9
Effective length of query: 276
Effective length of database: 675
Effective search space: 186300
Effective search space used: 186300
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
