Query= MSMg01no296_d02.b1 MSMg01no296_d02.b1 CHROMAT_FILE:
MSMg01no296_d02.b1 PHD_FILE: MSMg01no296_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:19 2005
(245 letters)
>mm_chr14_29974841_29975485
Length = 645
Score = 453 bits (234), Expect = e-132
Identities = 234/234 (100%)
Strand = Plus / Plus
Query: 1 ttcagatccaggcatttgctctcgttcacacctctctgttaaggaattcacagccctagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagatccaggcatttgctctcgttcacacctctctgttaaggaattcacagccctagc 260
Query: 61 tgatctgtttctataacagggtcttttctgagccatacctggtggaataaatgccaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgatctgtttctataacagggtcttttctgagccatacctggtggaataaatgccaagca 320
Query: 121 gcctgggctacagagatgtgctcagaaatgtaaacccacccacataaacaccaaattagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctgggctacagagatgtgctcagaaatgtaaacccacccacataaacaccaaattagt 380
Query: 181 gcctatagtgtttgaattgtgatagcataatatataaagccagggcttggagac 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcctatagtgtttgaattgtgatagcataatatataaagccagggcttggagac 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no296_d02.g1 MSMg01no296_d02.g1 CHROMAT_FILE:
MSMg01no296_d02.g1 PHD_FILE: MSMg01no296_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:19 2005
(226 letters)
>mm_chr14_30135058_30135682
Length = 625
Score = 402 bits (208), Expect = e-117
Identities = 220/224 (98%), Gaps = 1/224 (0%)
Strand = Plus / Minus
Query: 1 ttaaggtctttctatcattacagaatgtacagggtaccgtttacttctgtgagccagtgg 60
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 423 ttaaggtctttctatcattacagaatgtacaggg-actgtttacttctgtgagccagtgg 365
Query: 61 cttgtgacacattgaactccccacctttcacccagccttcacatagatgatcctgaatcc 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cttgtgacacactgaactccccacctttcacccagccttcacatagatgatcctgaatcc 305
Query: 121 cctgccaggagctaaggagacagccagtgttcatactcttagatttctgaaaccatgaga 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 cctgccaggagctaaggggacagccagtgttcatactcttagatttctgaaaccatgaga 245
Query: 181 caaaacaaatctctttccttcatgaattactcataaaccggtgt 224
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 caaaacaaatctctttccttcatgaattactcataaaccggtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 625
Length adjustment: 9
Effective length of query: 217
Effective length of database: 616
Effective search space: 133672
Effective search space used: 133672
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
