Query= MSMg01no296_g23.b1 MSMg01no296_g23.b1 CHROMAT_FILE:
MSMg01no296_g23.b1 PHD_FILE: MSMg01no296_g23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:37 2005
(254 letters)
>mm_chr14_27612988_27613640
Length = 653
Score = 476 bits (246), Expect = e-139
Identities = 252/254 (99%), Gaps = 1/254 (0%)
Strand = Plus / Plus
Query: 1 agctaatgaatcacttggaaaaggaaaagtactttcctttctatgttaatttctctgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agctaatgaatcacttggaaaaggaaaagtactttcctttctatgttaatttctctgcac 260
Query: 61 ggaccagtgccaatcaggttcaggtgagttaaagtcagaacatggggtttataattatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaccagtgccaatcaggttcaggtgagttaaagtcagaacatggggtttataattatta 320
Query: 121 tactttatcttatttgataaatagtaaagtatttacagctctatggtaaacatgcaactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactttatcttatttgataaatagtaaagtatttacagctctatggtaaacatgcaactt 380
Query: 181 tataaatctatgactcaaaagataacacttttatattagcacttaagatttgtctctttt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 tataaatctatgactcaaaagataacacttttatattagcacttaagatttgtcactttt 440
Query: 241 ttttttcttttttg 254
||||| ||||||||
Sbjct: 441 ttttt-cttttttg 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 653
Length adjustment: 9
Effective length of query: 245
Effective length of database: 644
Effective search space: 157780
Effective search space used: 157780
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no296_g23.g1 MSMg01no296_g23.g1 CHROMAT_FILE:
MSMg01no296_g23.g1 PHD_FILE: MSMg01no296_g23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:32:37 2005
(661 letters)
>mm_chr14_27612625_27613684
Length = 1060
Score = 1208 bits (625), Expect = 0.0
Identities = 652/661 (98%), Gaps = 1/661 (0%)
Strand = Plus / Plus
Query: 1 tcctgcctctgcttcccacaccatagtagcgttgggattagacacaaactagcaggtctg 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tcctgcctctgcttcccacaccatagtagcgttgggattagacacaagctagcaggtctg 260
Query: 61 atgttcatatgggttccagagatccacactcaggccatcagacttgcatggcaagtgctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgttcatatgggttccagagatccacactcaggccatcagacttgcatggcaagtgctt 320
Query: 121 ttacctgctgagccatctcctgggctttattagtctttcatgcacaagcataagtgtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttacctgctgagccatctcctgggctttattagtctttcatgcacaagcataagtgtatg 380
Query: 181 gagtattagaaagaaattatttgactactatttaaagtttttaaaacatgtatttgagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtattagaaagaaattatttgactactatttaaagtttttaaaacatgtatttgagtt 440
Query: 241 ctttccataaaaaatgcatttgtacttccttccgtcttgaattacgttatttattgtttt 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 ctttccataaaaaatgcatttgtacttccttccatcttgaattacgttatttattgtttt 500
Query: 301 cataaaggccgctgctttttgtgggtccgactggtacaggaaagccaccgtatgtgaagg 360
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 501 cataaaggccgctgctttttgtgggtccgactggtacaggaaagtcagtgtatgtgaagg 560
Query: 361 ataagctaatgaatcacttggaaaaggaaaagtactttcctttctatgttaatttctctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataagctaatgaatcacttggaaaaggaaaagtactttcctttctatgttaatttctctg 620
Query: 421 cacggaccagtgccaatcaggttcaggtgagttaaagtcagaacatggggtttataatta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cacggaccagtgccaatcaggttcaggtgagttaaagtcagaacatggggtttataatta 680
Query: 481 ttatactttatcttatttgataaatagtaaagtatttacagctctatggtaaacatgcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatactttatcttatttgataaatagtaaagtatttacagctctatggtaaacatgcaa 740
Query: 541 ctttataaatctatgactcaaaagataacacttttatattagcacttaagatttgtctct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 741 ctttataaatctatgactcaaaagataacacttttatattagcacttaagatttgtcact 800
Query: 601 tttttttttcttttttggcctaagaagtaaaaattgatttaattggagaagacagtgtaa 660
|||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 801 tttttttt-cttttttggcctgagaagtaaaaattgatttaattggagaagaaagtgtaa 859
Query: 661 g 661
|
Sbjct: 860 g 860
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1060
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1050
Effective search space: 683550
Effective search space used: 683550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
