Query= MSMg01no297_e24.b1 MSMg01no297_e24.b1 CHROMAT_FILE:
MSMg01no297_e24.b1 PHD_FILE: MSMg01no297_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:44 2005
(672 letters)
>mm_chr14_105747964_105749035
Length = 1072
Score = 1230 bits (636), Expect = 0.0
Identities = 660/668 (98%)
Strand = Plus / Minus
Query: 5 gaattcaagtgtggccaaatttacaatattaagacaagattatttggaaaggcgatacgt 64
|||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 872 gaattcaagtgtggtaaaatttacaatattaagacaagattatttggaagggcgatacgt 813
Query: 65 gatgttctctcgcttttgtctattgttccatggtcttctaaagctgagatgtttgtcatg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gatgttctctcgcttttgtctattgttccatggtcttctaaagctgagatgtttgtcatg 753
Query: 125 gaattgcctcgacccgtcttgtaaaggcgaattgttgcgtattctgctttccttgccttg 184
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 752 gaattgcctcgacccgtcttgtaaaggagaattgttgcgtattctgctttccttgccttg 693
Query: 185 cctcgattttcatgccattataatcctttgttccactccgagtagcaccttaccttcctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 cctcgattttcatgccattataatcctttgttccactccgagtagcaccttaccttcctt 633
Query: 245 gctatttagacaaccaagtaattgcagatggttatcaaggcgctatctttgctgtctcta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gctatttagacaaccaagtaattgcagatggttatcaaggcgctatctttgctgtctcta 573
Query: 305 agccaaggccaacctgcttaattccttcaccctgtcctcctaactcagtccgctccaagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agccaaggccaacctgcttaattccttcaccctgtcctcctaactcagtccgctccaagc 513
Query: 365 cctcaaccacctccctgactccttgtctgaaccttttccaagaaaacgtctgcagctttc 424
|||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 512 cctcaatcatctccctgactccttgtctgaaccttttccaagaaaacgtctacagctttc 453
Query: 425 ctggtctcgggctcccagaacaaatgtggttctcaggtgccatttcagcagactcacttc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ctggtctcgggctcccagaacaaatgtggttctcaggtgccatttcagcagactcacttc 393
Query: 485 cctaccctggggttaatctctggaattcttcacgtctctttggtcttttttctcttttcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 cctaccctggggttaatctctggaattcttcacgtctctttggtcttttttctcttttcc 333
Query: 545 tatattcagggtgggtccaaggtatttcacggcccaaggcaaagtgaaacttctttttct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tatattcagggtgggtccaaggtatttcacggcccaaggcaaagtgaaacttctttttct 273
Query: 605 tttgtgcctgtaattggactcatttcagaagggcccatgcttcccgccccgcctggattt 664
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 272 tttgtgcctgtaattggactcatttcagaagggcccatgcttcccgccctgcctggattt 213
Query: 665 ctgaatta 672
||||||||
Sbjct: 212 ctgaatta 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 672
Length of database: 1072
Length adjustment: 10
Effective length of query: 662
Effective length of database: 1062
Effective search space: 703044
Effective search space used: 703044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no297_e24.g1 MSMg01no297_e24.g1 CHROMAT_FILE:
MSMg01no297_e24.g1 PHD_FILE: MSMg01no297_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:33:44 2005
(638 letters)
>mm_chr14_105583230_105584267
Length = 1038
Score = 1149 bits (594), Expect = 0.0
Identities = 630/648 (97%), Gaps = 10/648 (1%)
Strand = Plus / Plus
Query: 1 actctgtagaccaggttggcctcaaaggcctgtgccaccaccaccagcttggtttgactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actctgtagaccaggttggcctcaaaggcctgtgccaccaccaccagcttggtttgactt 260
Query: 61 tcttacctgtggctatcaccatgttgcccactcagcatcaggaagtctgctcagccatgc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttacctgtggctattaccatgttgcccactcagcatcaggaagtctgctcagccatgc 320
Query: 121 tttgattctgggagaccctgggaaatctggaattttgctccagaggatccaccacatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgattctgggagaccctgggaaatctggaattttgctccagaggatccaccacatctt 380
Query: 181 catttctatgtcttgagtacctggagtcacaaaggaagtgagtacaagggactctgggat 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttctacgtcttgagtacctggagtcacaaaggaagtgagtacaagggactctgggat 440
Query: 241 atgaactggaggaccacccattccaatctttgaagttctcatcagttaatcatccttaca 300
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaactggaggaccacccattcccatctttgaagttctcatcagttaatcatccttaca 500
Query: 301 gaaggttcaatgttaggtgcaatttctctccagaaagtttcattcgcaatactcagagtc 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaggttcaatgttaggcgcaatttctctccagaaagtttcattcgcaatactcagagtc 560
Query: 361 ccaggagccattgcttaactctacaaacattttatattcctctttgctcctgtatatgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaggagccattgcttaactctacaaacattttatattcctctttgctcctgtatatgga 620
Query: 421 atgtcatagtacagaatgccattattattattgatgtacttagtcaatgaatcatcaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgtcatagtacagaatgccattattattattgatgtacttagtcaatgaatcatcaata 680
Query: 481 tagggatacagcatataggctttctgtttcctgaaatttgaaagtcacaataaatttaaa 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 tagggatacagcatataggctttctctttcctgaaatttgaaagtcacaataaatttaaa 740
Query: 541 aactaaaaaaaaaaaaac----------tctcatatatattgtatgtatgtggagaaatt 590
|||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 741 aactaaaaaaaaaaaaacaaaaaaaacctctcatatatattgtatacatgtggagaaatt 800
Query: 591 ttctattaagaaatatgtaaaagatactactttggggggaatatcaaa 638
|||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 801 ttctattaagaaatatgtaagagatactactttggggggaatatcaaa 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
