Query= MSMg01no300_k15.b1 MSMg01no300_k15.b1 CHROMAT_FILE:
MSMg01no300_k15.b1 PHD_FILE: MSMg01no300_k15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:52 2005
(399 letters)
>mm_chr14_109799963_109800761
Length = 799
Score = 617 bits (319), Expect = 0.0
Identities = 366/395 (92%), Gaps = 23/395 (5%)
Strand = Plus / Plus
Query: 5 gaattctatacttctctataaaagatatttttaa-ttttttaaaatagagccaaaaataa 63
||||||||||||| | ||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 204 gaattctatacttttatataaaagagatttttaatttttttaaaatagagccaaaaataa 263
Query: 64 agatcattgctatgaaaaatattttaaatttcatcttttcctatattaaatactttaaaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agatcattgctatgaaaaatattttaaatttcatcttttcctatattaaatactttaaaa 323
Query: 124 tacataggaattaaattaattacaattagtaagataaatacagaattgatgaattttctt 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgcataggaattaaattaattacaattagtaagataaatacagaattgatgaattttctt 383
Query: 184 gaatattttatttatattaactaaacatttaaatttatgtttagattctttcttgatttt 243
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 384 gaatattttatttatattaactaaacattttaatttatgtttagattctttcttgatttt 443
Query: 244 cctgttggggttattgggtaagcatgataacactctgcttggtgtatcacatggttattt 303
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccttttggggttattgggtaagcatgataacactctgcttggtgtatcacatggttattt 503
Query: 304 gattgaataattttatatatatatatatatatatatatatatatgtatatatatatataa 363
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 504 gattgaataatt--atatatatatatatatatatatatat-------------------- 541
Query: 364 ttcatatattggttggaatatatatgtattttatt 398
|||||||||||||||||||||||||||||||||||
Sbjct: 542 ttcatatattggttggaatatatatgtattttatt 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 399
Length of database: 799
Length adjustment: 9
Effective length of query: 390
Effective length of database: 790
Effective search space: 308100
Effective search space used: 308100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_k15.g1 MSMg01no300_k15.g1 CHROMAT_FILE:
MSMg01no300_k15.g1 PHD_FILE: MSMg01no300_k15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:37:52 2005
(598 letters)
>mm_chr14_109958405_109959402
Length = 998
Score = 837 bits (433), Expect = 0.0
Identities = 478/493 (96%), Gaps = 1/493 (0%)
Strand = Plus / Minus
Query: 107 caccagtcagaatggctaagatcaaaaattcaggtgacagcagatgctggtgaggatgtg 166
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 996 caccagtcagaatggctaagatcaaaaattcaggtgacaggagatgctggtgaggatgtg 937
Query: 167 gataaagaggaacactcctccattgttggtgggattgcaagcttgtacaaccactctgga 226
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 gataacgaggaacactcctccattgttggtgggattgcaagcttgtacaaccactctgga 877
Query: 227 aatcagtctggtggttcctcagaaaattggacatagtactaccggatgatccagcaataa 286
||||||||||||| || ||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 876 aatcagtctggtgtttactcagaaaattggacatagtactacaggaggatccagcaataa 817
Query: 287 gtctcctgggcatatacccagaagatgctccaacatgtaataaggatacatgctccacta 346
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 816 gtctcctgggcatatacccagaagatactccaacatgtcataaggatacatgctccacta 757
Query: 347 tgttcatagcaggcttatttataatagctagaagctggaaagaaccgagatgcttttata 406
|||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 756 tgttcatagcagccttatttataatagctagaagctggaaagaaccgagttgcttttata 697
Query: 407 aatctaaaagatctttacattccctgttcttaaactattgttcatatactattagactta 466
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 696 agtctaaaagatctttacataccctgttcttaaactattgttcatatactattagactta 637
Query: 467 tttgaagttacttactgatactgtttgtttatgtatgttatatattatatatttatttgt 526
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 636 tttgaagttacttactgatactttttgtttatgtatgttatatattatatatttatttgt 577
Query: 527 gtacaagtgtgctgtaataca-tttttctgagaatgtgcaattcacatatgtttactaac 585
||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 576 gtacaagtgtgctgtaatacattttttctgggaatgtgcaattcacatatgtttactaac 517
Query: 586 cctgaaaagaagg 598
|||||||||||||
Sbjct: 516 cctgaaaagaagg 504
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
