TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCTGACTGCGCTGCTTGTAAAGTCAACATTAAGATTGAATTTTAATATC
AGGGTACAAAAAATATTGCTTTTTTTTCTAATCTTTTTCCTATAATACAT
TTACATAGTATACAGATTTTGTATCACCGGTATATATTCATAATGTATTC
CCTAAAAATATCATGACTGTATATTTCCCTAGATAACTGTTATATTTGAA
GTTTTCATTTTCATTTCTGTTTCAGTACCTAAATTACATATTAAAGATAA
TATGGTATTGAGAGTGTATTGAATTTAACTGTTATATCCAGAGAAATGAT
AATTAAATTGTTTTTAAAACTTAAATGAAAGTATTTTAAGTTAGCATGTA
TAATAAACATTACATTAGGATGTTCCCTACAATCCACAACTTCTGAGATA
TAGTTTATCAGTCTTCTGCTGTATATAAATCTATGTATTGAGATGTACTA
TAGTCACTCTGCAGGTATATACAAGTGTATACAGCAGATACCAAAGATTC
ATCAAAAAGATATGGACTCAGTACTTCCGTATAAGTCTTTCAGGGGAAGG
AGTGGTAGCCTGTATAGAAGGGAGAGGGTGTTGGCTTCACGGTTATTAGT
TATAGAGCAAAGCTGAAGTGCTGTTTCCCAAGTGGGCAGAGACTTCTTTG
GTTTACCCTTCTCCTTCTGCCAAGAACACATGGGCATATATCAGTTN

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTATGGATTGGGAGGCTCTATCAGGATTTG
ATTGAGACAAATGCAGACACTTACAGTTGAAATTGGATTGAGTTTGTGAA
CTATATGGAGGAGTTGGGGGAAGGACTGAAGGAGATGAGAGGGATTGTAA
CCCTATAGGGAGATCAACAGGTTCCAGAACCCTCAGAGCTCCTAGAGATT
ATGCCATTAATTGTGGAGCATACCTATGCTGATCCACTGTTCCTGGCATA
TTTTTAGTGGAGGACTGCCTTCTCCATCCTCTGTGGGAAAGGATGATCTT
AATTCTGTGGAAACTTAATGCTCCAGGCAGGAGGGATATGGATGGGGGTG
ACAAGAGGGTGGGTGGACAGGTGAGAGGGCACCCTCTCAGAGGCAGTGTG
TGTGAGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTCGCTG
TTCCTCCTCTTCTATCTCTTCATTTTCCCTCTTATTTTCCCCCTTTCTCC
CTCACAATCTTTACTTATCTTTCTTCACCCCTATCCTCTACTCTTATTTC
TCCCTTATCCTTATTTTTTATCTTTATATTTTCCCCCATCTATTCTTTAT
TTATCTTCTCTCTTTTTGTACTCTTCCCCCCTTTCCCCTCCCCCTCCTTT
TTTTTCACCCATCTCTCCCCTCATTTATTTCTCCCTCTCTCTTTCTCCAT
CTTTTTCCCAATATTCTTTT

Query= MSMg01no300_m13.b1 MSMg01no300_m13.b1 CHROMAT_FILE:
MSMg01no300_m13.b1 PHD_FILE: MSMg01no300_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:01 2005
         (644 letters)



>mm_chr14_84038898_84039940
          Length = 1043

 Score = 1129 bits (584), Expect = 0.0
 Identities = 626/640 (97%), Gaps = 1/640 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctgactgcgctgcttgtaaagtcaacattaagattgaattttaatatcagggta 64
           ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgacagtgctgcttgtaaagtcaacattaagattgaattttaatatcagggta 264

                                                                       
Query: 65  caaaaaatattgcttttttttctaatctttttcctataatacatttacatagtatacaga 124
           ||||||||| ||  |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaaaaatagtg-attttgttctaatctttttcctataatacatttacatagtatacaga 323

                                                                       
Query: 125 ttttgtatcaccggtatatattcataatgtattccctaaaaatatcatgactgtatattt 184
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttttgtatcattggtatatattcataatgtattccctaaaaatatcatgactgtatattt 383

                                                                       
Query: 185 ccctagataactgttatatttgaagttttcattttcatttctgtttcagtacctaaatta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccctagataactgttatatttgaagttttcattttcatttctgtttcagtacctaaatta 443

                                                                       
Query: 245 catattaaagataatatggtattgagagtgtattgaatttaactgttatatccagagaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 catattaaagataatatggtattgagagtgtattgaatttaactgttatatccagagaaa 503

                                                                       
Query: 305 tgataattaaattgtttttaaaacttaaatgaaagtattttaagttagcatgtataataa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgataattaaattgtttttaaaacttaaatgaaagtattttaagttagcatgtataataa 563

                                                                       
Query: 365 acattacattaggatgttccctacaatccacaacttctgagatatagtttatcagtcttc 424
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaattacattaggatgttccctacaatccacaacttctgagatatagtttatcagtcttc 623

                                                                       
Query: 425 tgctgtatataaatctatgtattgagatgtactatagtcactctgcaggtatatacaagt 484
           ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgctgcatatatatctatgtattgagatgtactatagtcactctgcaggtatatacaagt 683

                                                                       
Query: 485 gtatacagcagataccaaagattcatcaaaaagatatggactcagtacttccgtataagt 544
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtatacggcagataccaaagattcatcaaaaagatatggactcagtacttccgtataagt 743

                                                                       
Query: 545 ctttcaggggaaggagtggtagcctgtatagaagggagagggtgttggcttcacggttat 604
           |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct: 744 ctttcaggggaaggagtggtagcctgtagagaagggagagggtgttggcttcatggttat 803

                                                   
Query: 605 tagttatagagcaaagctgaagtgctgtttcccaagtggg 644
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 tagttatagagcaaagctgaagtgctgtttcccaagtggg 843


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1043
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1033
Effective search space:   654922
Effective search space used:   654922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)