Query= MSMg01no300_n17.b1 MSMg01no300_n17.b1 CHROMAT_FILE:
MSMg01no300_n17.b1 PHD_FILE: MSMg01no300_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:06 2005
(663 letters)
>mm_chr14_85689358_85690421
Length = 1064
Score = 949 bits (491), Expect = 0.0
Identities = 512/519 (98%), Gaps = 1/519 (0%)
Strand = Plus / Minus
Query: 1 taaatgatagttttcttaaaaattgaagtgactaattcaagcagatctcagttgctttag 60
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct: 519 taaatgatagttttcttaaaaagtgaagtgactaattcaagcagatctcagttgttttac 460
Query: 61 atctgagcatatgtctaagaaccactgaatacaagagtttgagatagcaactatttgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 atctgagcatatgtctaagaaccactgaatacaagagtttgagatagcaactatttgatc 400
Query: 121 tgaaatagcatttttcatttagaaagcaatatgtaagaaaggtattttcataagtgtttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tgaaatagcatttttcatttagaaagcaatatgtaagaaaggtattttcataagtgtttc 340
Query: 181 aaactatattttgctcagttttataaatcagaatttaacttctcgc-tttctgtatatta 239
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 339 aaactatattttgctcagttttataaatcagaatttaacttctcgcttttctgtatatta 280
Query: 240 tgtagggagcagctattagacgtattttggagaaattatgttgaggaatgtaggtggtat 299
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgtagggagcagctattggacgtattttggagaaattatgttgaggaatgtaggtggtat 220
Query: 300 ttaaaatagcattcaggcaggagtgggtgcatctctgactcttacccgctcttgggaatc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 ttaaaatagcattcaggcaggagtgggtgcatctctgactcttacccgctcttgggaatc 160
Query: 360 ttttcttcccgttgagttacctttcttgtctggcctccatatgagggtttttgcctttta 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 159 ttttcttcccgttgagttacctttcttgtctggcctccatatgagggtttttgcctttca 100
Query: 420 ttattgtatcttgttttaaaataattatattctttattaatttgaaataattacatccat 479
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ttgttgtatcttgttttaaaataattatattctttattaatttgaaataattacatccat 40
Query: 480 tgtttattataacctaaaaccatttccttatccacaatc 518
|||||||||||||||||||||||||||||||||||||||
Sbjct: 39 tgtttattataacctaaaaccatttccttatccacaatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1064
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1054
Effective search space: 688262
Effective search space used: 688262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no300_n17.g1 MSMg01no300_n17.g1 CHROMAT_FILE:
MSMg01no300_n17.g1 PHD_FILE: MSMg01no300_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:06 2005
(354 letters)
>mm_chr14_85546974_85547727
Length = 754
Score = 654 bits (338), Expect = 0.0
Identities = 350/354 (98%)
Strand = Plus / Plus
Query: 1 gataggatcttattcacattaggcgagtatcctaccctaggtatattccctagcccgaac 60
|||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||
Sbjct: 201 gataggatcttattcacattaggcaagtatcctaccctaggtttattccctagccctaac 260
Query: 61 cagaagatcttcatttcatattttttagtaaattacagaaatcaaatattaatgtgctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaagatcttcatttcatattttttagtaaattacagaaatcaaatattaatgtgctaa 320
Query: 121 gtgacttagctaagttttgcaactcagatgattgaatggaaaattttaatcacagttgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgacttagctaagttttgcaactcagatgattgaatggaaaattttaatcacagttgtt 380
Query: 181 gacatttctatctagcattcacttcaccagggagtcaattttacaagacaggaactatta 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 gacatttctatctagcattcacttcaccagagagtcaattttacaagacaggaactatta 440
Query: 241 gaatcttttcaaacttaggtgctgccttagttacttttctattgccatgacagaatacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatcttttcaaacttaggtgctgccttagttacttttctattgccatgacagaatacca 500
Query: 301 tgagcaaggcaagttataaaagaaaggatttaatttcattggtcatgcttacag 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgagcaaggcaagttataaaagaaaggatttaatttcattggtcatgcttacag 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
