TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAATCCGCGGAA
TTCCTTGCCCATCTCTGGAAAAGACAACCAGCTTCAAACCCCAAACATGA
GATTATCACTGACCTTCTGCCTGCGAGGCGACTGGCTGCAAGATAAGTCT
TAATTTCATGTATAAACTTTTTCATAGCCCAGTTCTCCTCAAAGAGGGAC
TCCTCCTAGCTGTCCCTCTCCTTCCTCTGCTTGCTTCATGGCTGCTGACT
GACCCTTGTCTGGACTACCTGCTAGTCCAACTCCAGGCTCTGGGCAGGAC
TCTCTAACTCCCCCAGGGTTCTCTCTGTCCCACAAAATAAAAGGTCAAAA
TCTCTCAGTAAATCAGACAAGGCCCTAACCATTGAGCTAAATGCACCATT
TTCCAGCTTAGCAGACACCACCCTACCAGCATACATAGGTCTCTAAAGGA
TTCAGGGATCTGGCAGCTAAGACTTAAGCTACTTGTTTCTTGAACTATCC
ATTTGAAAGGGAAGATATTTAAGAGAAACAAATGACTCAACTGTGAAGAA
CGCCACCCTTCCACTTGGCCATCCAGCTGCCTCATTTCCCTCCTAGGGAC
TCACTTTTACTCTCATATCCTAAACAATGAGCACCATCGCTATCCCTTTT
AGATTGCAACCTGCTGTGCCCTGTGGAGTGGCAGGGGCAGCCTGCTGCCT
ACTGAAAAATCTACCCATTCCACAGCCTGGAGCTGTAACCTGGGAGTGTC
TCCC

ATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCAGCTATTTCTCCCGCATCATATCTG
CCTGCATACAGCCATGCTTCCTGCCATGACAATAACGAACTAAACCTTTG
AACATGTAAGCCAACCATAGTAAAATATTTTCCTTCATAAGAGTTCCTGT
GGTCCAATATGTACTCACTGATAAGTGGATATTAGCCCCAAACCTAGGAT
ACCCAAGATATAAGATACAAGTTGCTAAACACATGAAACTCAAGAAGAAT
GAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGAATTGGGAACAAAAC
ACCCATGGAAGGAGTTATCTAGAGACAAACCTTGGAGCTGAGATGAAAGG
ATGGACCATGTAGAGACCCCCCCACCCAGGGATCCACCCCATAATCAGCA
TCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTATTGAAAGGAC
ACAGATGTAGCTGTCTCTTGTGAGACTAAGCCGGGGCCTAGCAAACACAG
AAGTGGATGCTCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAATGG
AGGAGCTAGAGAAAGTAGCCAAGGAGCTAAAGGGATCTGCAACCCTATAG
GTGGAACAACATTATGAACTAACCAGTACCCCGGAGCTCTTGACTCTAGC
TGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGC
CCATTGGA

Query= MSMg01no301_c20.b1 MSMg01no301_c20.b1 CHROMAT_FILE:
MSMg01no301_c20.b1 PHD_FILE: MSMg01no301_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:38:31 2005
         (688 letters)



>mm_chr14_60744460_60745546
          Length = 1087

 Score = 1104 bits (571), Expect = 0.0
 Identities = 649/685 (94%), Gaps = 19/685 (2%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttgcccatctctggaaaa-gacaaccagcttcaaaccccaaacatgagattat 63
           |||||||||||||| || ||||||| ||||||||||||||||||||| | ||||||||||
Sbjct: 205 gaattccttgcccagctatggaaaaagacaaccagcttcaaaccccaga-atgagattat 263

                                                                       
Query: 64  cactgaccttctgcctgcgaggcgactggctgcaagataagtcttaatttcatgtataaa 123
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cactgaccttctgcctgtgaggcgactggctgcaagataagtcttaatttcatgtataaa 323

                                                                       
Query: 124 ctttttcatagcccagttctcctcaaagagggactcctcctagctgtccctctccttcct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctttttcatagcccagttctcctcaaagagggactcctcctagctgtccctctccttcct 383

                                                                       
Query: 184 ctgcttgcttcatggctgctgactgacccttgtctggactacctgctagtccaactccag 243
           ||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||
Sbjct: 384 ctgcttgcttcatggctgctgactgacccctgtccagactacctgctagcccaactccag 443

                                                                       
Query: 244 gctctgggcaggactctctaactcccccagggttctctctgtcccacaaaataaaaggtc 303
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 444 gctctgggcaggactctctaactcccccagggttctc-ctgtcccacaaaataaaaggtc 502

                                                                       
Query: 304 aaaatctctcagtaaatcagacaaggccctaaccattgagctaaatgcaccattttccag 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aaaatctctcagtaaatcagacaaggccctaaccattgagctaaatgcaccattttccag 562

                                                                       
Query: 364 cttagcagacaccaccctaccagcatacataggtctctaaaggattcagggatctggcag 423
           ||||||| | | ||  |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cttagcaaataacagtctactagcatacataggtctctaaaggattcagggatctggcag 622

                                                                       
Query: 424 ctaagacttaagctacttgtttcttgaactatccatttgaaagggaagatatttaagaga 483
           ||||||||||||||||||||||                ||||||||||||||||||||||
Sbjct: 623 ctaagacttaagctacttgttt----------------gaaagggaagatatttaagaga 666

                                                                       
Query: 484 aacaaatgactcaactgtgaagaacgccacccttccacttggccatccagctgcctcatt 543
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 667 aacaaatgactcaactgtgaagaacgccacccttccacttggccgtccagctgcctcatt 726

                                                                       
Query: 544 tccctcctagggactcacttttactctcatatcctaaacaatgagcaccatcgctatccc 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 tccctcctagggactcacttttactctcatatcctaaacaatgagcaccatcgctatccc 786

                                                                       
Query: 604 ttttagattgcaacctgctgtgccctgtggagtggcaggggcagcctgctgcctactgaa 663
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 787 ttttagattgcaacctgctgtgtcctgtggagtggcaggggcagcctgctgcctactgaa 846

                                    
Query: 664 aaatctacccattccacagcctgga 688
           ||||||||||||| |||||||||||
Sbjct: 847 aaatctacccatttcacagcctgga 871


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1087
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1077
Effective search space:   730206
Effective search space used:   730206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)