Query= MSMg01no307_g16.b1 MSMg01no307_g16.b1 CHROMAT_FILE:
MSMg01no307_g16.b1 PHD_FILE: MSMg01no307_g16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:28 2005
(692 letters)
>mm_chr14_92824224_92825315
Length = 1092
Score = 1278 bits (661), Expect = 0.0
Identities = 683/693 (98%), Gaps = 5/693 (0%)
Strand = Plus / Plus
Query: 5 gaattcttacagttgcccaacagcttcagtaaattggctggaaaaaaaaaaaaa-----c 59
|||||||||||| || |||||||||||||||||||||||||||||||||||| |
Sbjct: 200 gaattcttacagctggtaaacagcttcagtaaattggctggaaaaaaaaaaaaaaaaaac 259
Query: 60 agaggatttaatagccctcctttatataagtgataaatgggctgagaaagaggttaggga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agaggatttaatagccctcctttatataagtgataaatgggctgagaaagaggttaggga 319
Query: 120 gacaatactcttcacaatagccacaaataatacaaaataccttggtgtaactctaaccga 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gacaatactcttcacaatagccacaaataatacaaaataccttggtgtaactctaaccga 379
Query: 180 gcaagtgaaagacctgcgtttctattgttaattgtagttttctttgctaggatttttatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gcaagtgaaagacctgcgtttctattgttaattgtagttttctttgctaggatttttatc 439
Query: 240 aatccttgtttcaattagattttttgaaatctgaatgctcacaaaaatactgacagaaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatccttgtttcaattagattttttgaaatctgaatgctcacaaaaatactgacagaaca 499
Query: 300 atatgcacaggaatgtctatcaagacagaaaatgtgctttctgcattaagatgttataaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 atatgcacaggaatgtctatcaagacagaaaatgtgctttctgcattaagatgttataaa 559
Query: 360 ttcctttttttttaaccaaggaaaagccctaatgtgtatttgtagatatttattctacat 419
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttcctttttttttaaacaaggaaaagccctaatgtgtatttgtagatatttattctacat 619
Query: 420 tggcataataatgtcatatctgaatcctctaagaatttgttgagatggtctttaatatgc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tggcataataatgtcatatctgaatcctctaagaatttgttgagatggtctttaatatgc 679
Query: 480 atgttagataaaaagtacaacatgctctgaagtttagggttctagtagtaaatattaatt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 atgttagataaaaagtacaacatgctctgaagtttagggttctagtagtaaatattaatt 739
Query: 540 tggggggaacatatggaacacttttgaataacaaaacatgaaataaattccataaaggca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tggggggaacatatggaacacttttgaataacaaaacatgaaataaattccataaaggca 799
Query: 600 cacacatttgaaaacataataataatgtttaaaccacacattgaatctcacatgttaata 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cacacatttgaaaacataataataatgtttaaaccacacattgaatctcacatgttaata 859
Query: 660 actgtatacttctaaaccatactaaagatgaac 692
|||||||||||||||||||||||||||||||||
Sbjct: 860 actgtatacttctaaaccatactaaagatgaac 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space: 737924
Effective search space used: 737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no307_g16.g1 MSMg01no307_g16.g1 CHROMAT_FILE:
MSMg01no307_g16.g1 PHD_FILE: MSMg01no307_g16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:48:28 2005
(656 letters)
>mm_chr14_92990528_92991583
Length = 1056
Score = 1214 bits (628), Expect = 0.0
Identities = 649/656 (98%)
Strand = Plus / Minus
Query: 1 agttgaatagctggagatatgcaaatgcgtgttccacggacagacttttttcagctgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 856 agttgaatagctggagatatgcaaatgcgtgttccacggacagacttttttcagctgaaa 797
Query: 61 ttgacgctttgatcactgctttgaaaaggaatgattattaaacacaattcccttgggaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 ttgacgctttgatcactgctttgaaaaggaatgattattaaacacaattcccttgggaaa 737
Query: 121 ttaaaattcaaatagagactccgtgttccttgccatgacagagcatctgctccaggaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ttaaaattcaaatagagactccgtgttccttgccatgacagagcatctgctccaggaatg 677
Query: 181 gcagtgtttctgtaaacagcaacgaaactagataaagcagtatagattgccccataaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gcagtgtttctgtaaacagcaacgaaactagataaagcagtatagattgccccataaaca 617
Query: 241 tcccagggctgtgcaagttataagtggaaaggatgaggtgactgcttttgtaggcgagtt 300
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 616 tcacagggctgtgcaagttataagtggaaaggatgaggtgactgctcctgtaggcgagtt 557
Query: 301 tccaaacagcatcacagacaaacacatttcgaatgaacagcgccacaatgctggccagat 360
|||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||
Sbjct: 556 tccaaacagcatcacagacaaacacatttcgaatgaacagtgttataatgctggccagat 497
Query: 361 aatcaggtccagcttgaataagttagatggaaattcaataaggtcagacagttggaattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aatcaggtccagcttgaataagttagatggaaattcaataaggtcagacagttggaattc 437
Query: 421 agcaggatatgtcacaggaactattcacagagtaggtgtcccctagaaaatatctgcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agcaggatatgtcacaggaactattcacagagtaggtgtcccctagaaaatatctgcttt 377
Query: 481 agggtgagaaagaagaaagattccaaaagttaggaaggctattagaaagttttattagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agggtgagaaagaagaaagattccaaaagttaggaaggctattagaaagttttattagta 317
Query: 541 aaagatttaagtattcagataaaatcatttatatcctaaagcaaatgaaaacaaaatcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaagatttaagtattcagataaaatcatttatatcctaaagcaaatgaaaacaaaatcct 257
Query: 601 atttcagccaacttcagaaacataagagtaaagcccacatgataatgactaccaga 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atttcagccaacttcagaaacataagagtaaagcccacatgataatgactaccaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1056
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1046
Effective search space: 675716
Effective search space used: 675716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
