TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCTGTTATACCTGTACCCCATTTTACATAGGTTGTTTTTGTAACCAA
TTTTTTGAGTTCTCTATATATTTTGGATATTAGCTCTATCAGATGTGGAG
TTGGGAAATCTTCTTCTCTGTAGGCTGCCACTTTGTCTAAATGATAAAGA
CTTTTGCCATGCAGAAGTTTCTCAATTTCCTGAGGGTCCATTATAAACTG
TTGATCTTGGTGCCTGTACCAATGGCATTCTGTTCAGAAAGTCTTTTCCT
GGGCCAGTGAGTTCAAAGCTATCCCCCTTTTCTCTTTTACCAGTGTACCC
GATTTTATGTTGAAGTATTTGATCCATTTGCAGTAAAGTTTTGTGTGGGG
TGATAAGTATGGACACATTTTGATCCTTCTACATGCACCTATCCCAGTTT
GACCAGTACCTTTTGTTAAAAATTTTGGTTTTTTTTTCCCCCGGGGTGTA
TTTCTGGCCTCTTTTCAAATATCAGATGTCCATAATCGTGTAGGTGCATG
CCTGGGTGCCTGGGTCTTCAGTTTGATTCCACTGATCAAGGAGTCTGCTT
TTATGCCAAGACCATGTGGTTTCTATTACTATAATTTAGTAGTACAACTT
GAAATCCAGAATGGTGACACTTCCACTTTTATTATTCAGGATTGGCTAAG
CATTCCTGTTTTGGTGCGCGTGTGTGCATGTGN

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTGCCACAGGACCTAAATTCAAATC
CCATTTCAACCGGTGACCTGTTCTGTGACCTTGGACTCTTCCCCTACTGA
TGCTGTTGCCAAGCCTACACAAGCTGGCTAGCATCTTCCTCATTGGTTTG
TTAAGACACTTACATGAAGCAACATGAGATGGCTTCCTTGGCACTGTAGA
ACGCTGGCTCCACATCAAGTGTGTGGCAGAAACTTGGAAGATAGACGTGA
ATGAGAAGCTCCTGCAGCAAGTGTGGCACCTTTAGCAAGACTGTCACTGA
ACGGGGTTGATGGATCCCGGGCGTCCTGTCCAAGGATATTTTAAGAACAC
CACCACAACCAAAAGCTGCCAGAAAGTGACACATGCAGGGATCTGGAGAT
TCCATGATTCTAGAGGTGCTGTCATTCTGTAAATTCTGCAACTATTGCAA
AGGTCCGAGCCTTTCTGTTCATATGGTTTTAATTACTGTGGGGTTTTCCC
CTCTACTATACAGATTCTAGTGCCCTGGTGATATTTTAGTCCCAAATTTA
ACTATATAAACATTCATTTTCCAGATTAATATCAATGTTTAAAGTTCCTT
TCTTAAGAAAAAAAAAACTGTTCACTACCCACAGATGTGCTCTCATTGGG
AGAGAAAAAAATAAGCAATACAAAAATATATAA

Query= MSMg01no307_n12.g1 MSMg01no307_n12.g1 CHROMAT_FILE:
MSMg01no307_n12.g1 PHD_FILE: MSMg01no307_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:49:00 2005
         (659 letters)



>mm_chr14_77550717_77551776
          Length = 1060

 Score = 1176 bits (608), Expect = 0.0
 Identities = 647/660 (98%), Gaps = 1/660 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgccacaggacctaaattcaaatcccatttcaaccggtgacctgttctgtgaccttgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 tctgccacaggacctaaattcaaatcccatttcaaccggtgacctgttctgtgaccttgg 863

                                                                       
Query: 61  actctt-cccctactgatgctgttgccaagcctacacaagctggctagcatcttcctcat 119
           |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 862 actcttccccctactgatgctgttgccaagcctacacaagctggctagcgtcttcctcat 803

                                                                       
Query: 120 tggtttgttaagacacttacatgaagcaacatgagatggcttccttggcactgtagaacg 179
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tggtttgttaagaaacttacatgaagcaacatgagatggcttccttggcactgtagaacg 743

                                                                       
Query: 180 ctggctccacatcaagtgtgtggcagaaacttggaagatagacgtgaatgagaagctcct 239
           ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||
Sbjct: 742 ctggctccacatcaagtgtgtggcagaaacttggaagacggacgtgaatgagaagctcct 683

                                                                       
Query: 240 gcagcaagtgtggcacctttagcaagactgtcactgaacggggttgatggatcccgggcg 299
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 682 gcagcaagtgtggcacctttagcaagactgtcactgaatggggttgatggatcccgggcg 623

                                                                       
Query: 300 tcctgtccaaggatattttaagaacaccaccacaaccaaaagctgccagaaagtgacaca 359
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 622 tcctgtccaaggatattttaagaacaccaccacaaccaaaagctggcagaaagtgacaca 563

                                                                       
Query: 360 tgcagggatctggagattccatgattctagaggtgctgtcattctgtaaattctgcaact 419
           |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgcaggaaactggagattccatgattctagaggtgctgtcattctgtaaattctgcaact 503

                                                                       
Query: 420 attgcaaaggtccgagcctttctgttcatatggttttaattactgtggggttttcccctc 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 attgcaaaggtccgagcctttctgttcatatggttttaattactgtggggttttcccctc 443

                                                                       
Query: 480 tactatacagattctagtgccctggtgatattttagtcccaaatttaactatataaacat 539
           ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 442 tactatacagattctagtgccttgatgatattttagtcccaaatttaactatataaacat 383

                                                                       
Query: 540 tcattttccagattaatatcaatgtttaaagttcctttcttaagaaaaaaaaaactgttc 599
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 382 tcattttccagattaatatcaatgtttaaagttcctttctcaagaaaaaaaaaactgttc 323

                                                                       
Query: 600 actacccacagatgtgctctcattgggagagaaaaaaataagcaatacaaaaatatataa 659
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 322 actacccacagatgtgctctcattgggagagaaaaaagtaagcaatacaaaaatatataa 263


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1060
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1050
Effective search space:   681450
Effective search space used:   681450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)