Query= MSMg01no311_d21.b1 MSMg01no311_d21.b1 CHROMAT_FILE:
MSMg01no311_d21.b1 PHD_FILE: MSMg01no311_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:02 2005
(325 letters)
>mm_chr14_15670201_15670925
Length = 725
Score = 613 bits (317), Expect = e-180
Identities = 320/321 (99%)
Strand = Plus / Plus
Query: 5 gaattccagccccacaaggaggtctcataagtctccatgtgataaaaagactaaatgcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagccccacaaggaggtctcataagtctccatgtgataaaaagactaaatgcag 264
Query: 65 actattaaagaacattcaaggaggagccgccagttctcagactctcaagacattagcaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 actattaaagaacattcaaggaggagccgccagttctcagactctcaagacattagcaaa 324
Query: 125 gggttgcctcagaataccttgtttgctgagaaaattagtgacaattgatctgcttttaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggttgcctcagaataccttgtttgctgagaaaattagtgacaattgatctgcttttaag 384
Query: 185 gtatcacctttgtctatgctgcttttgattgattggcagaaggtagattacacttctctt 244
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 385 gtatcacctttgtctatgctgcttttgattgattggcagaaggtagattacaattctctt 444
Query: 245 taaagcaaagaatgcactgactagtctgtttatgatattttgatacatcctggtccagtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taaagcaaagaatgcactgactagtctgtttatgatattttgatacatcctggtccagtg 504
Query: 305 tccctggctgacagtctttcc 325
|||||||||||||||||||||
Sbjct: 505 tccctggctgacagtctttcc 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no311_d21.g1 MSMg01no311_d21.g1 CHROMAT_FILE:
MSMg01no311_d21.g1 PHD_FILE: MSMg01no311_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:02 2005
(295 letters)
>mm_chr14_15712187_15712881
Length = 695
Score = 516 bits (267), Expect = e-151
Identities = 288/301 (95%), Gaps = 10/301 (3%)
Strand = Plus / Minus
Query: 1 gtgaagagtgactgaggagataacccaaactcacatacagtg----------cacacaca 50
|||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 568 gtgaagagtgactgtggagataacccaaactcacatacagtgtacacacacacacacaca 509
Query: 51 ctcacacacacacacacgaaaactacatactcattagagtaaatgcacagagtccctggc 110
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 cacacacacacacacacgaaaactacatactcattagagtaaatgcacagagtccctggc 449
Query: 111 agtgtctactcctttcagcagagtagaaatacattggaactcccttaatcacataaaaga 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agtgtctactcctttcagcagagtagaaatacattggaactcccttaatcacataaaaga 389
Query: 171 catatatagaggcgtaggactaacacactagctagtgttgaaagcctgaatacattgttt 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 catatatagaggcgtaggactaacacactagctagtgttgaaagcctgaatacattgttt 329
Query: 231 ctgcttttaaaacaggtcaagaactttgatgccatagcatatgcccactgtcccaggact 290
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ctgattttaaaacaggtcaagaactttgatgccatagcatatgcccactgtcccaggact 269
Query: 291 g 291
|
Sbjct: 268 g 268
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
