TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCTGTGTTTATGCTCTTAGGCAGTAATTACAGGCAGGATGCTACACC
CACCTGGGATTTTATGGGTTCTAGGTATCTGAGCTGTGTTCCTCATCTTT
GTGTACCTGGAACTCTCCTATTCAGCATGATTGTTGGCTAGCTGAGTTTC
AGGGAGACTCTTGTCTCCACCCACCCACTGGTGGGATTACAGTGTGAGCC
ACTGTGCTACCCTTGTACATATATGGTGGAGATCTGAACTTAGATCTTTG
TGCTTCTGTAGCATGCTCTTTACTGACCGAGCCATCTCTCTAGCCCTGTC
ATTGTTTCTTTTAAAGGTGGTTAATGTTAATATTTCTCGAATTCATTTTA
TCCATTTCTAAAATCAAACCATTAAAATTAATTAAACAAGTTAAAATTAG
TAGCTAACTCTAGTTGATGTACTGACCATGGGTTTTACAATCAGTTTTTT
TTTTTTTTAAATTTCCTTTTTTTTTCCCCACAAAAAAGTCCCTCTGCTGG
CTAGTTTTATGTCAACTTGACACAAGCGAAAGTCACTGAGAAAAAGCCTC
AATTAAGAAAATGCCTCCATAAGATCAGGCTACAGGCAATCCTGTAAGGC
ATTTTCAAAATTAGTGATTGATGACAGAGCCCAATGTGGGTGAGACCATC
CCTGGGCTGGTGATCCTAAGTTCTATAAGATAG

AATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGTATAGGTCTGTACCCCATTTTT
AATAGGGTTATTTGTTTCTCTGGAGTCTAATTTCTTTCTTTCTTTTTTTT
TTCTTGTTTTGTTTTTTGAGACAGGGTTTCTCTGTAGCCCTGGCTGTCCT
AGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCTGC
CTCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGGGCCACCATGT
GCAGAGAGTCTAATTTCTTGGGTTATTAGTTCCCTATCAGATTTAGGATT
GGTAATGTTTTTTTCCCACACCCGCCGCGCTGCCTTTTTGTCTTACTGAC
AGTGTCCTTTGCCTTACAGAAGCCTTGCAATTTTATGAGGTCCCATTTGC
TTACACAATGGAGTACTACACAGCTACTAAAAACAATGAATTTATGAAAT
TCTTAGACAAATGGATGGATCTGGAGGATATCATCCTGAGTGGGGTAACC
CAATCACAAAAGAACACACATGATTTGCACTCACTGATAAGTGGATATTA
GCCCAGAAGCTCAGAATACCCAAGATACAATTCTCAAAGCATATGAAACT
CAAGAATAAGGAAGACCAAATGTAGATACTTTGATCCTTCTTAGAAGGGG
GAACAAAATATTCATGGAAGGAGTTACAAAGACAAAGT

Query= MSMg01no312_e10.b1 MSMg01no312_e10.b1 CHROMAT_FILE:
MSMg01no312_e10.b1 PHD_FILE: MSMg01no312_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:53:19 2005
         (668 letters)



>mm_chr14_88044797_88045864
          Length = 1068

 Score = 1280 bits (662), Expect = 0.0
 Identities = 665/666 (99%), Gaps = 1/666 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctctgtgtttatgctcttaggcagtaattacaggcaggatgctacacccacctg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctgtgtttatgctcttaggcagtaattacaggcaggatgctacacccacctg 263

                                                                       
Query: 64  ggattttatgggttctaggtatctgagctgtgttcctcatctttgtgtacctggaactct 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggattttatgggttctaggtatctgagctgtgttcctcatctttgtgtacctggaactct 323

                                                                       
Query: 124 cctattcagcatgattgttggctagctgagtttcagggagactcttgtctccacccaccc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctattcagcatgattgttggctagctgagtttcagggagactcttgtctccacccaccc 383

                                                                       
Query: 184 actggtgggattacagtgtgagccactgtgctacccttgtacatatatggtggagatctg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 actggtgggattacagtgtgagccactgtgctacccttgtacatatatggtggagatctg 443

                                                                       
Query: 244 aacttagatctttgtgcttctgtagcatgctctttactgaccgagccatctctctagccc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacttagatctttgtgcttctgtagcatgctctttactgaccgagccatctctctagccc 503

                                                                       
Query: 304 tgtcattgtttcttttaaaggtggttaatgttaatatttctcgaattcattttatccatt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtcattgtttcttttaaaggtggttaatgttaatatttctcgaattcattttatccatt 563

                                                                       
Query: 364 tctaaaatcaaaccattaaaattaattaaacaagttaaaattagtagctaactctagttg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tctaaaatcaaaccattaaaattaattaaacaagttaaaattagtagctaactctagttg 623

                                                                       
Query: 424 atgtactgaccatgggttttacaatcagtttttttttttttt-aaatttccttttttttt 482
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 624 atgtactgaccatgggttttacaatcagtttttttttttttttaaatttccttttttttt 683

                                                                       
Query: 483 ccccacaaaaaagtccctctgctggctagttttatgtcaacttgacacaagcgaaagtca 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ccccacaaaaaagtccctctgctggctagttttatgtcaacttgacacaagcgaaagtca 743

                                                                       
Query: 543 ctgagaaaaagcctcaattaagaaaatgcctccataagatcaggctacaggcaatcctgt 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ctgagaaaaagcctcaattaagaaaatgcctccataagatcaggctacaggcaatcctgt 803

                                                                       
Query: 603 aaggcattttcaaaattagtgattgatgacagagcccaatgtgggtgagaccatccctgg 662
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aaggcattttcaaaattagtgattgatgacagagcccaatgtgggtgagaccatccctgg 863

                 
Query: 663 gctggt 668
           ||||||
Sbjct: 864 gctggt 869


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space:   696164
Effective search space used:   696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)