Query= MSMg01no313_a18.b1 MSMg01no313_a18.b1 CHROMAT_FILE:
MSMg01no313_a18.b1 PHD_FILE: MSMg01no313_a18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:18 2005
(716 letters)
>mm_chr14_21506842_21507957
Length = 1116
Score = 1025 bits (530), Expect = 0.0
Identities = 557/566 (98%), Gaps = 2/566 (0%)
Strand = Plus / Minus
Query: 1 catttcttcttacaaaggaagatggcctatgaaactggccatagcaagccggagtgtatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 catttcttcttacaaaggaagatggcctatgaaactggccatagcaagccggagtgtatg 505
Query: 61 gaaagaaaaccaaaaattctacagaatggttcctcctgtcctggagatgacttttgcttc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gaaagaaagccaaaaattctacagaatggttcctcctgtcctggagatgacttttgcttc 445
Query: 121 cgtccctgtgtatctatgatactttcccctatcacacacaagagaattctgtgggatttc 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 444 cgtccctgtgtatctatgatactttcccccatcacacacaagagaattctgtgggatttc 385
Query: 181 tatgggacacctactgttgtcccatagatatcatcttacaaacataagaacagcatccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tatgggacacctactgttgtcccatagatatcatcttacaaacataagaacagcatccaa 325
Query: 241 ctgtcctcactagcaacccacacagaaaatgattaggcagaacatatactgtgccttgat 300
| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 324 ccgtcctcactagcaatccacacagaaaatgagaaggcagaacatatactgtgccttgat 265
Query: 301 ggtccagttctagaaaactctttttaagtacattaggttgtcaagacctaaataaacagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggtccagttctagaaaactctttttaagtacattaggttgtcaagacctaaataaacagc 205
Query: 361 tacctaatttttaaaaaatattttttgccaggattaggggtgcacgcctttaatcccagc 420
|||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 204 tacctaatttttaaaaaata-tttttgccaggattaggggcgcacgcctttaatcccagc 146
Query: 421 acttaggaagtggaggcaggcagatttctgatttccaggccagcctggtctacagagtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 acttaggaagtggaggcaggcagatttctgatttccaggccagcctggtctacagagtga 86
Query: 481 gtcccaggaataggtgtacaggaagccctgtcttgaaaaaacaaaaacaaaaactgctaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 85 gtcccaggaataggtgtacaggaagccctgtcttgaaaaaacaaaaacaaaaa-tgctaa 27
Query: 541 ttttaggtaatggattgacagatggg 566
||||||||||||||||||||||||||
Sbjct: 26 ttttaggtaatggattgacagatggg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 716
Length of database: 1116
Length adjustment: 10
Effective length of query: 706
Effective length of database: 1106
Effective search space: 780836
Effective search space used: 780836
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no313_a18.g1 MSMg01no313_a18.g1 CHROMAT_FILE:
MSMg01no313_a18.g1 PHD_FILE: MSMg01no313_a18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:54:18 2005
(424 letters)
>mm_chr14_21343193_21344016
Length = 824
Score = 781 bits (404), Expect = 0.0
Identities = 419/428 (97%), Gaps = 8/428 (1%)
Strand = Plus / Plus
Query: 1 gagtatagtatgtactacagag----aaaaaaatcaccaagagctatttccttgaatcag 56
|||||||||||||||||||| | ||| |||||||||||||||||||||||||||
Sbjct: 201 gagtatagtatgtactacagtgttctaaa----tcaccaagagctatttccttgaatcag 256
Query: 57 tctactaaccagtatataaatttttatcattatctaatctcaccagtgaaaataaatttg 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tctactaaccagtatataaatttttatcattatctaatctcaccagtgaaaataaatttg 316
Query: 117 atgcttttaaagactctataatcaaaaatattgttaacaggaaccaacttcagaagctag 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 atgcttttaaagactctataatcaaaaatattgttaacaggaaccaacttcagaagctag 376
Query: 177 ttatactcactctcctaatatcatccagtgtgtgtatttctggtgaaagtccaccatgaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttatactcactctcctaatatcatccagtgtgtgtatttctggtgaaagtccaccatgaa 436
Query: 237 cacaaagaaattgttggtttagaagtgcagcaaggggcaagctgtcaaaagcctccatac 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cacaaagaaattgttggtttagaagtgcagcaaggggcaagctgtcaaaagcctccatac 496
Query: 297 aagcttcatagactctttctgaatatttaattttacctagagaaagaagaatattagcat 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aagcttcatagactctttctgaatatttaattttacctagagaaagaagaatattagcat 556
Query: 357 ttgaaaattctttgctattttaagaatgttttatttttacatttatttagttgtgtatgt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ttgaaaattctttgctattttaagaatgttttatttttacatttatttagttgtgtatgt 616
Query: 417 acgtgtgt 424
||||||||
Sbjct: 617 acgtgtgt 624
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
