Query= MSMg01no313_k21.b1 MSMg01no313_k21.b1 CHROMAT_FILE:
MSMg01no313_k21.b1 PHD_FILE: MSMg01no313_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:39 2005
(666 letters)
>mm_chr14_74507841_74508910
Length = 1070
Score = 1164 bits (602), Expect = 0.0
Identities = 653/672 (97%), Gaps = 8/672 (1%)
Strand = Plus / Plus
Query: 1 ctccattttg-tttaaaatttaaaatgtgggctcactctaggatggagaactgttgaaca 59
|||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 ctccattttgttttaaaatttaaaatgtgggctcagtctaggatggagaactgttgaaca 260
Query: 60 attctctagaagacatctgaaagcaatagatgctcaaaggcaaataaaagtagttcccta 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attctctagaagacatctgaaagcaatagatgctcaaaggcaaataaaagtagttcccta 320
Query: 120 tgaatgcataattaatgttagtgactatatcttttctcccttcatttcttttgagagttt 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaatgcgtaattaatgttagtgactatatcttttctcccttcatttcttttgagagttt 380
Query: 180 gtctaatacaat----taaaaaaaacagtttatccacttacataattgtgattttgaaaa 235
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 gtctaatacaataaaaaaaaaaaaacagtttatccacttacataattgtgattttg-aaa 439
Query: 236 aaaatcacatttaatttaacatttacttcccattttatttaactcaaacattaaggattt 295
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 aaaatcacacttaatttaacatttactttccattttatttaactcaaacattaaggattt 499
Query: 296 tctcaactcaaaggctgaaaagttgacacttggaataattgacatgtgaacaaatgct-c 354
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||| || |
Sbjct: 500 tctcaactcaaaggctgaaaagttgacacttggaatgattgacatgtaaacaaat-cttc 558
Query: 355 aactgctctgaacttttccagcttaactctcttcgtgttctatttttcttgggatcaaga 414
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 559 aactgctctgaacttttccagcttaactctctttgtgttccatttttcttgggatcaaga 618
Query: 415 atactctgagattgatctgaaatgattagatttagtgccatcatttgattctcatgactc 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atactctgagattgatctgaaatgattagatttagtgccatcatttgattctcatgactc 678
Query: 475 aggaaaagatttttaaaatattttttcagtcatgttgacaagatatacattaggcttttt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aggaaaagatttttaaaatattttttcagtcatgttgacaagatatacattaggcttttt 738
Query: 535 catgggataggtcatgttcttacacatgaaaagactgcatttttagtcaaggtctaagca 594
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 catcggataggtcatgttcttacacatgaaaagactgcatttttagtcaaggtctaagca 798
Query: 595 gaagaggaggcggcattgtgcttgaaccatatctagttttgcatttgtgatctgatattt 654
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 799 gaagaggaggcggcattgtgcttgaactatatctagttttgcatttgtgatctgatattt 858
Query: 655 taggtagtctgg 666
||||||||||||
Sbjct: 859 taggtagtctgg 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1070
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1060
Effective search space: 695360
Effective search space used: 695360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_k21.g1 MSMg01no313_k21.g1 CHROMAT_FILE:
MSMg01no313_k21.g1 PHD_FILE: MSMg01no313_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:40 2005
(389 letters)
>mm_chr14_74586182_74586970
Length = 789
Score = 717 bits (371), Expect = 0.0
Identities = 377/379 (99%)
Strand = Plus / Minus
Query: 1 ccaagtcaacccttgcctaaaatttcttgagagcacttgaaagaaaaatgataattctct 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 ccaagtcaaaccttgcctaaaatttcttgagagcacttgaaagaaaaatgataattctct 520
Query: 61 atgcttcaagtcttttttttaggggtgggggaaggtaatacatctacaacaggatctatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 atgcttcaagtcttttttttaggggtgggggaaggtaatacatctacaacaggatctatt 460
Query: 121 aactgttatgtatgagttgctagaaaatgggccatcatctaatatatgactttcttagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aactgttatgtatgagttgctagaaaatgggccatcatctaatatatgactttcttagac 400
Query: 181 cttttttcttggaaccaggagaaatgagaaaaaaatgagaaaatttaaaatgtaatcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 cttttttcttggaaccaggagaaatgagaaaaaaatgagaaaatttaaaatgtaatcaag 340
Query: 241 acaattcatgtcagattataaatgctggaataacatgtttcaacatttttaaagggtgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 339 acaattcatgtcagattataaatgctggaataacatgtttcaacatttttaaagggttaa 280
Query: 301 agacaatgaagcaggttgtgtggaaggatggagattacaaaaagacaatttggcttcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 agacaatgaagcaggttgtgtggaaggatggagattacaaaaagacaatttggcttcatt 220
Query: 361 ttagaaaaatatgcataga 379
|||||||||||||||||||
Sbjct: 219 ttagaaaaatatgcataga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
