Query= MSMg01no316_b08.b1 MSMg01no316_b08.b1 CHROMAT_FILE:
MSMg01no316_b08.b1 PHD_FILE: MSMg01no316_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:45 2005
(531 letters)
>mm_chr14_78107371_78108301
Length = 931
Score = 911 bits (471), Expect = 0.0
Identities = 516/531 (97%)
Strand = Plus / Plus
Query: 1 cagatggccgccgccgtgtgagctgcatcaggataaggccccatagcaccccctctcaaa 60
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 cagatggccgccgccgcgtgagctgcatcaggataaggccccatagcagcccctctcaaa 260
Query: 61 ggacccagggctttgcagacagttgtcatccgcttgcttttctttatacgaagaaaaaaa 120
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 ggacccagagctttgcagacagttgtcatccgcttgcttttctttatatgaagaaaaaaa 320
Query: 121 atcggttatcgaaagtgacagtgacttgtcatggtctacggatgctagagcgctttgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcggttatcgaaagtgacagtgacttgtcatggtctacggatgctagagcgctttgaaa 380
Query: 181 agcctgtgagaaatttgaaatttcagaccggcctgaaggtttcagaaacaaggaggaaga 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 agcctgtgagaaatttgaaatttcagaccgacctgaaggtttcagaaacaaggaggaaga 440
Query: 241 cattgtgagggtggctaatgaggcaggttcctcaggtcacattcacactttattccatgc 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 441 cattgtgagggtggctaatgaggcaggttcctcaggtcacattcacacaagattcaatgc 500
Query: 301 tcgacatgtcacatggagcgaccatcaccatcaatagcctaaacacccgatatggtgctc 360
|||| |||||||||||||||||||||||||||||||| ||||| | | ||||||||||||
Sbjct: 501 tcgagatgtcacatggagcgaccatcaccatcaatagactaaagatctgatatggtgctc 560
Query: 361 aaggatgtctgtcaatagctgtttttaacattattttctaagtgttaaaaatgacagccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggatgtctgtcaatagctgtttttaacattattttctaagtgttaaaaatgacagccg 620
Query: 421 agttatcctcagctgtgttccttatgggtcacactgggagtcagaccttggggtgttttt 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 agttatcctcagctgtgttccttacgggtcacactgggagtcagaccttggggtgttttt 680
Query: 481 ctgaagttccgctctctcatctgaaaattagcagtgtttttgccaaatgca 531
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgaagttccgctctctcatctgaaaattagcagtgtttttgccaaatgca 731
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 931
Length adjustment: 10
Effective length of query: 521
Effective length of database: 921
Effective search space: 479841
Effective search space used: 479841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_b08.g1 MSMg01no316_b08.g1 CHROMAT_FILE:
MSMg01no316_b08.g1 PHD_FILE: MSMg01no316_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:45 2005
(289 letters)
>mm_chr14_78297335_78298022
Length = 688
Score = 482 bits (249), Expect = e-140
Identities = 279/289 (96%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 ttgctgcatctgtagcagagccagccttcaccacctggcacaggagtaccctttgcagta 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 488 ttgctgcatctgtagcagagccagccttcaccacctggcacaggagtacactttgcagta 429
Query: 61 aagctgagactgtgttgtctttcattgttgggcggcagtaagaactgcatatacattttg 120
|||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 428 aagctgaggctgtgctgtctttcattgttgggcggcagtaagaactgcatagacattttg 369
Query: 121 tgacatggttctagcctggcaactcctggaagatgatggaaagtccagtgctgtggataa 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 368 tgacatggttctagcctggcaactcccggaagatgatggaaagtccagtgctgtggataa 309
Query: 181 tccccaggtctctgttagatttccatagagaagtcatcaccttaagaacccccacttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tccccaggtctctgttagatttccatagagaagtcatcaccttaagaacccccacttgaa 249
Query: 241 ggcttgcattcttgtgattgggggatgggattcccccacaagattgtta 289
|||||||| |||||| |||||||||||| |||||||||||||| ||||
Sbjct: 248 ggcttgcaggcttgtggttgggggatggg-ttcccccacaagatggtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 688
Length adjustment: 9
Effective length of query: 280
Effective length of database: 679
Effective search space: 190120
Effective search space used: 190120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
