Query= MSMg01no316_b11.b1 MSMg01no316_b11.b1 CHROMAT_FILE:
MSMg01no316_b11.b1 PHD_FILE: MSMg01no316_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:45 2005
(340 letters)
>mm_chr14_101450795_101451534
Length = 740
Score = 630 bits (326), Expect = 0.0
Identities = 332/334 (99%)
Strand = Plus / Plus
Query: 5 gaattctttttcagtcagtaggatggtgagggttggtggttgggagaaaaaaaaccttgt 64
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattctttttcagtcagtaggatggtgagggttggtggttgggagaaaacaaaccttgt 264
Query: 65 ggcttcggggaagcaataactgaacctcaagtcatttctagttgtctagactttcagcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggcttcggggaagcaataactgaacctcaagtcatttctagttgtctagactttcagcat 324
Query: 125 atgcctcactaaagcaatcgtcactttctacactaatcttttattcccttcaagaccaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgcctcactaaagcaatcgtcactttctacactaatcttttattcccttcaagaccaga 384
Query: 185 atccttagtggtacttatttgagcaatggactcaatgtgttatgtttgtgatatatgtgt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atccttagtggtacttatttgagcaatggactcaatgtgttatgtttgtgatatatgtgt 444
Query: 245 atacagaaatgcatatatgcattgaataacaaccaatgaaaggagaggttaggaattggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atacagaaatgcatatatgcattgaataacaaccaatgaaaggagaggttaggaattggg 504
Query: 305 aagagagtggggaaatagggtttggagggagaaa 338
|||||||||||||||||| |||||||||||||||
Sbjct: 505 aagagagtggggaaatagcgtttggagggagaaa 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_b11.g1 MSMg01no316_b11.g1 CHROMAT_FILE:
MSMg01no316_b11.g1 PHD_FILE: MSMg01no316_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:57:45 2005
(647 letters)
>mm_chr14_101472657_101473704
Length = 1048
Score = 1199 bits (620), Expect = 0.0
Identities = 641/648 (98%), Gaps = 1/648 (0%)
Strand = Plus / Minus
Query: 1 ctgaattgtaagataaatggctgtgatttttatggggagtttgtatttaaacagaagcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ctgaattgtaagataaatggctgtgatttttatggggagtttgtatttaaacagaagcac 789
Query: 61 gaacttcctcaaggcttgagaaaacaaaggtcttttgctctctggagaacatcagttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 gaacttcctcaaggcttgagaaaacaaaggtcttttgctctctggagaacatcagttcct 729
Query: 121 cttggaaagtgttctatttctgaaatgtgtgatactttctcctgtcctttgtgaaccatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 cttggaaagtgttctatttctgaaatgtgtgatactttctcctgtcctttgtgaaccatg 669
Query: 181 agattcagctagggctttagagtccacaccacagcaaaaaactatttctttcaagcaggc 240
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 668 agattcagctagggctttagagcccacaccacagcaaaaaactatttctttcaagcaggg 609
Query: 241 acagttcaatcaagaagcacaatattttgcttgggaaaatacttctcacatggtaagcta 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 acagttcaatcaggaagcacaatattttgcttgggaaaatacttctcacatggtaagcta 549
Query: 301 atctacagccacactgacaagtgcttcatagtagtatgaaatggaacttgcaatattatc 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 548 atctacagccacactgacaagtgcttcgtagtagtatgaaatggaacttgcaatattatc 489
Query: 361 ttgttttttaaggatttt-aaaacttctttgacgcacacctacccccatagacccgtgaa 419
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttgttttttaaggatttttaaaacttctttgacgcacacctacccccatagacccgtgaa 429
Query: 420 ctatgttaaagttcaccatgctctatcagctaaattttataagagctctcagtagataaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctatgttaaagttcaccatgctctatcagctaaattttataagagctctcagtagataaa 369
Query: 480 tatgtacacttatatgtatgtatattatgaacagagctttcccccaacagccacatccat 539
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 tatatacacttatatgtatgtatattatgaacagagctttcccccaacagccacatccat 309
Query: 540 gctgcagagtttacagagttattggaaacacttcaggatgtggaaaatgggaattttgta 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gctgcagagtttacagagttattggaaacacttcaggatgtggaaaatgggaattttgta 249
Query: 600 gactgagagaccaaatgaatttagactaccttttgtccactcaatagt 647
||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 248 gactgagagaccaaatgaatttagactaccttttgtccactcagtagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1048
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1038
Effective search space: 661206
Effective search space used: 661206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
