Query= MSMg01no317_o14.b1 MSMg01no317_o14.b1 CHROMAT_FILE:
MSMg01no317_o14.b1 PHD_FILE: MSMg01no317_o14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:59 2005
(648 letters)
>mm_chr14_29179918_29180965
Length = 1048
Score = 810 bits (419), Expect = 0.0
Identities = 570/653 (87%), Gaps = 60/653 (9%)
Strand = Plus / Minus
Query: 1 agggcacccatctcggagggaatctgagaaccaggcactgaatactgaacctgagaga-- 58
|||||||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct: 1041 agggcacccatctcagagggaatctgagaaccaggc-------actgaacctgagagatg 989
Query: 59 tgctgatcagggaagagacttggtggggtgccataactggctgaggtctgtggattaggt 118
||| ||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 988 tgccgatcagggaagagac-tggtggggtgccatagctgactgaggtctgtggattaggt 930
Query: 119 gggctcccagggttatgagtcaggggaactgcccccagaagttggaggtatgtgggtcac 178
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 929 ggggtcccagggttatgagtcagggaaactgcccccagaagttggaggtatgtgggtcac 870
Query: 179 actagaactatgctaggataggcagggagtagtggctggaagaggcactctgtgagaaaa 238
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 actaaaactatgctaggataggcagggagtagtggctggaagaggcactctgtgagaaaa 810
Query: 239 actggctaacttc--cattggtgatgagacatgaagtctagctacacagggtctgggtag 296
||||||||||||| | || |||| |||||| ||||||||||| |||||||||||
Sbjct: 809 actggctaacttctgc--tgttgataagacattaagtctagctatacagggtctgg---- 756
Query: 297 agactattgggtctatcacccatcagc-catggctcagggcatccgctcacccccccaca 355
||||||| ||| | | | | |||
Sbjct: 755 --------------------catcagctcat-----------t--g-taa-------aca 737
Query: 356 cagcttcttccatatagaatgggactaaagactcttgacttcacatggacttctgctgga 415
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 cagcttcctccatatagaatgggactaaagactcttgacttcacatggacttctgctgga 677
Query: 416 ctcttcctaaagtggaccaaccaaccaaacaacaacaataaaaacagtgacaatttgggt 475
|||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 676 ctcttcctaacgtggaccaaacaaacaaacaacaacaataaaaacagtgacaatttgggt 617
Query: 476 gattttagtatgacaagtggtcaatcctcaggttcctctttcaggcttattttttaaaaa 535
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gattttagtatgacaagtggttaatcctcaggttcctctttcaggcttattttttaaaaa 557
Query: 536 tgactttaaaagtaattatttatatattttatgtatgtgagtacactgtccttgtcttta 595
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 556 tgactttaaaaataattatttatatatttaatgtatgtgagtacactgtccttgtcttta 497
Query: 596 gacataccagaagagggcatcgaaccttattatagatggttgtgagccaccat 648
|||||||||||| || ||||||||||| |||| ||||||||||||||||||||
Sbjct: 496 gacataccagaaaagagcatcgaacctcattacagatggttgtgagccaccat 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_o14.g1 MSMg01no317_o14.g1 CHROMAT_FILE:
MSMg01no317_o14.g1 PHD_FILE: MSMg01no317_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:59 2005
(639 letters)
>mm_chr14_28988604_28989641
Length = 1038
Score = 1143 bits (591), Expect = 0.0
Identities = 632/657 (96%), Gaps = 19/657 (2%)
Strand = Plus / Plus
Query: 1 tgtaaaaaaccaagctcacacagaggagtttgaaacacaccacatgtcaattgaagacac 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tgtaaaaaaccaagctcacacagaggagtttgaaacacaccacatgt-aattgaagacac 259
Query: 61 ggctcaggaatagtggggttcccagaggaacataggctaagaggaataacagaccctgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ggctcaggaatagtggggttcccagaggaacataggctaagaggaataacagaccctgga 319
Query: 121 gtacagaattttcagcttacagcaaactgaaatctttaggcaatgaccatttttggaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtacagaattttcagcttacagcaaactgaaatctttaggcaatgaccatttttggaact 379
Query: 181 gggtttttggatctatcaggttctgtgtgttgagatccatctagttccatatatgttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gggtttttggatctatcaggttctgtgtgttgagatccatctagttccatatatgttcat 439
Query: 241 atggaccacatgaccagaggattgactagagtcagagggctgcctaggaatagaatctaa 300
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 440 atggaccacatgatcagaggattgactggagtcagagggctgcctaggaatagaatctaa 499
Query: 301 atgccagtgatttctgacaagtcacttcctcactcaacatcgcccctagccgcatgggaa 360
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 500 atgccagtgatttctgacaagtcacttcctcactcaacattgtttctagccgcatgggaa 559
Query: 361 aagtaagtgacagtgcccacaagcagggtgtgctttgagaacagccagatatagtcttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagtaagtgacagtgcccacaagcagggtgtgctttgagaacagccagatatagtcttgt 619
Query: 421 ctagcatatagtctagcgggcaacagggttccttaactttctgtatgtgtgtgtgtgtgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctagcatatagtctagcgggcaacagggttccttaactttctgtatgtgtgtgtgtgtgt 679
Query: 481 gtgtgtgtgtgtgt------------------tttcaaagtgtctaagatatatataatc 522
|||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 680 gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttcaaagtgtctaagatatatataatc 739
Query: 523 acatatacatatcttatacacacagacatatatatatacacactatatacatctacatat 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 acatatacatatcttatacacacagacatatatatatacacactatatacatctacatat 799
Query: 583 atatacatatataaaacatcatatatacatatcacacacacagggatacaaagacaa 639
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atatacatatataaaacatcatatatacatatcacacacacagggatacaaagacaa 856
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 61
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1038
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1028
Effective search space: 646612
Effective search space used: 646612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
