Query= MSMg01no318_f03.b1 MSMg01no318_f03.b1 CHROMAT_FILE:
MSMg01no318_f03.b1 PHD_FILE: MSMg01no318_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:29 2005
(180 letters)
>mm_chr14_27106062_27106641
Length = 580
Score = 296 bits (153), Expect = 5e-85
Identities = 168/173 (97%), Gaps = 1/173 (0%)
Strand = Plus / Minus
Query: 1 cactttctggtctgacctgtttgcacctcagagaatgacttattacctcccagttctccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cactttctggtctgacctgtttgcacctcagagaatgacttattacctcccagttctccc 264
Query: 61 atcccatccaagttaacaacccccaggacaaaagtgcccttgctgctaataaactccccc 120
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 263 atcccatccaagttaacaacccccaagacaaaagtgcccttgctgctaagaaactccccc 204
Query: 121 tccggctccctctctcttcctctcccctctcctct-ctctctctctctctctc 172
||| ||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 203 tccagctccctctctctccctctcccctctcctcttctctctctctctctctc 151
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 180
Length of database: 580
Length adjustment: 8
Effective length of query: 172
Effective length of database: 572
Effective search space: 98384
Effective search space used: 98384
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no318_f03.g1 MSMg01no318_f03.g1 CHROMAT_FILE:
MSMg01no318_f03.g1 PHD_FILE: MSMg01no318_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:29 2005
(161 letters)
>mm_chr14_26669008_26669568
Length = 561
Score = 311 bits (161), Expect = 1e-89
Identities = 161/161 (100%)
Strand = Plus / Plus
Query: 1 gactgtgactagcagaggacagcaaatgtctcttttcgactgcatgaagtcctccttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gactgtgactagcagaggacagcaaatgtctcttttcgactgcatgaagtcctccttgta 260
Query: 61 gctgatagtgttaaagtgtaccttcaaattcaacgtgatcttttcttatcactgagagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgatagtgttaaagtgtaccttcaaattcaacgtgatcttttcttatcactgagagat 320
Query: 121 gtatcagaaattcccactataaaaccaattctggtggcatg 161
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtatcagaaattcccactataaaaccaattctggtggcatg 361
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 161
Length of database: 561
Length adjustment: 8
Effective length of query: 153
Effective length of database: 553
Effective search space: 84609
Effective search space used: 84609
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
