Query= MSMg01no319_d12.b1 MSMg01no319_d12.b1 CHROMAT_FILE:
MSMg01no319_d12.b1 PHD_FILE: MSMg01no319_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:31 2005
(631 letters)
>mm_chr14_72882124_72883162
Length = 1039
Score = 1050 bits (543), Expect = 0.0
Identities = 609/635 (95%), Gaps = 8/635 (1%)
Strand = Plus / Minus
Query: 5 gaattctgaggccattactcccttgagtttgaattgagaataagagggaaaatataatta 64
||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||||
Sbjct: 839 gaattctgaggccatcaatcccttgagtttgaattgagaataagagggaaaagataatta 780
Query: 65 ggtgcctgccacagacctgggtgtggggggaagggagaggaaga----cagac----aga 116
|||||||||||||| ||||||||||||||||||||||||||| ||||| |||
Sbjct: 779 agtgcctgccacagaattgggtgtggggggaagggagaggaagacaggcagacagagaga 720
Query: 117 cagacagattatatctagattatgaaccttcttctctgggcatcttcctgatactacctc 176
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 cagacagattatctctagattatgaaccttcttctctgggcatcttcctgatactacctc 660
Query: 177 ctaaggaggagacagaatcataggggctataatgaggtgggggtaaccagatagcctatc 236
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 659 ctaacgaggagacagaatcataggggctataatgaggtggcggtaaccagatagcctatc 600
Query: 237 cttcaggatggcacctactcaccccccagagctatcaggccccactgtcgaccattctat 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 cttcaggatggcacctactcaccccccagagctatcaggccccactgtcgaccattctat 540
Query: 297 acccactgccccactatcccaatgtttctttctgtctcctacgatgtttctctccatgtc 356
||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct: 539 acccactgccccactatcccagtgtttctttctgtctcctaggatgtttctttccatgtc 480
Query: 357 ctctgagtgcctgccacccccccctggccatttctgtgctgcgtctggcctctctgctcc 416
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ctctgagtgcctgccatgcccccctggccatttctgtgctgcgtctggcctctctgctcc 420
Query: 417 ttcaggaccctgtgctcctggctacttctgtctatcgggagtctcctctccaaccccaac 476
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ttcaggaccctgcgctcctggctacttctgtctatcgggagtctcctctccaaccccaac 360
Query: 477 aggtatgaaaccctttgggtataaaggggctctgacccctcaagagaccttgtggtgggg 536
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 359 aggtatgaaaccctttgggtctaaaggggctctgaccccacaagagaccttgtggtgggg 300
Query: 537 aaccctgggggaggcttaagactggggtaactacatgctggataatttgagggaagaggg 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaccctgggggaggcttaagactggggtaactacatgctggataatttgagggaagaggg 240
Query: 597 gatatgtatgagtggagactgggtataacccttcc 631
||||||||| |||||||||||||||||||||||||
Sbjct: 239 gatatgtataagtggagactgggtataacccttcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1039
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1029
Effective search space: 639009
Effective search space used: 639009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_d12.g1 MSMg01no319_d12.g1 CHROMAT_FILE:
MSMg01no319_d12.g1 PHD_FILE: MSMg01no319_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:31 2005
(355 letters)
>mm_chr14_72799916_72800671
Length = 756
Score = 654 bits (338), Expect = 0.0
Identities = 344/346 (99%), Gaps = 1/346 (0%)
Strand = Plus / Plus
Query: 10 tccccacaagactgtcgctgaaagcttaggtttgagtgagtgggatggcccagtgggtaa 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 tccccacaagactgtcgctgaaagcttaggtttgagtgagtgggatggcccagtgggtaa 269
Query: 70 atgcgtttgctgccactcctgatgatctgagatccatccccggtctccacatggtgggaa 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atgcgtttgctgccactcctgatgatctgagatccatccccggtctccacatggtgggaa 329
Query: 130 gagaggactgactcccagagtcagctctgcgactcagaagtcgctggtgagttgcagggc 189
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 330 gagaggactgactcccagagtcagctctgcgactcagaagtcactggtgagttgcagggc 389
Query: 190 cagagatgtttgcttcatttctctttctttctgtgttcacctggaaagggaaagaaagga 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cagagatgtttgcttcatttctctttctttctgtgttcacctggaaagggaaagaaagga 449
Query: 250 agaaatcgatgctgactatccagtccagaaacactggccaagcactgcccccc-tgccct 308
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 450 agaaatcgatgctgactatccagtccagaaacactggccaagcactgccccccctgccct 509
Query: 309 gtgcacagagagcaatcactggagatgctcactgcccttatcaggg 354
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gtgcacagagagcaatcactggagatgctcactgcccttatcaggg 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 756
Length adjustment: 9
Effective length of query: 346
Effective length of database: 747
Effective search space: 258462
Effective search space used: 258462
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
