Query= MSMg01no319_g24.b1 MSMg01no319_g24.b1 CHROMAT_FILE:
MSMg01no319_g24.b1 PHD_FILE: MSMg01no319_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:47 2005
(700 letters)
>mm_chr14_101023122_101024222
Length = 1101
Score = 973 bits (503), Expect = 0.0
Identities = 539/557 (96%), Gaps = 13/557 (2%)
Strand = Plus / Minus
Query: 151 gtccttcatgattttttgggtgcacgccaaatcgggaattgggtgggggtttccccacta 210
|||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 1101 gtccttcatgatttttggggtgcatgccaaatcgggaattgggtggggatttccccacta 1042
Query: 211 ggtctaacaacatcaattatatacaaatgtccactcttcttttattcacatgtgtacatg 270
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 ggtctaacaacatcaattatatacaaatgtccactcttcttttattcacatgtgtacatg 982
Query: 271 caataccagatagtccatgctcctcttttgtgactttcctaccacaatggcctttaacct 330
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 caataccagatagtccgtgctcctcttttgtgactttcctaccacaatggcctttaacct 922
Query: 331 ttaatactaagccaaaataacaacaacaggaaagtaattaagtgacccccccaa--c--- 385
|||||||||||||||||||||||||||||||||||||||||| |||| | |
Sbjct: 921 ttaatactaagccaaaataacaacaacaggaaagtaattaagagacc------aggctat 868
Query: 386 -ttcctccctcatcaaagcaattctcacagagatcattggcaacctctgaggaaagaaca 444
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 tttcctccctcatcaaagcaattctcacagagatcattggcaacctctgaggaaagaaca 808
Query: 445 tactttaa-atggctgacatttcagctatattctatataatttcaacaatttcttttctt 503
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 tactttaacatggctgacatttcagctatattctatataatttcaacaatttcttttctt 748
Query: 504 ggcttgagtgacaaccaccattaaaaagaatagtcctctcaagttcactcctcattctgg 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 ggcttgagtgacaaccaccattaaaaagaatagtcctctcaagttcactcctcattctgg 688
Query: 564 ggtcacccatgagtttttttctgcatgtgtacctcatttcctatttaatatgcactcact 623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ggtcacccatgagtttttttctgcatgtgtacctcatttcctatttaatatgcactcact 628
Query: 624 gtctgtctgtctataaggaaatttgctacagccagacatcagttgagttcatgaagacta 683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gtctgtctgtctataaggaaatttgctacagccagacatcagttgagttcatgaagacta 568
Query: 684 taaaaccaaaatctggg 700
|||||||||||||||||
Sbjct: 567 taaaaccaaaatctggg 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1101
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1091
Effective search space: 752790
Effective search space used: 752790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_g24.g1 MSMg01no319_g24.g1 CHROMAT_FILE:
MSMg01no319_g24.g1 PHD_FILE: MSMg01no319_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:47 2005
(293 letters)
>mm_chr14_100843830_100844522
Length = 693
Score = 542 bits (280), Expect = e-158
Identities = 289/292 (98%)
Strand = Plus / Plus
Query: 1 tacttacccttctcttgaccatatttgcattggtgtttctattatatgtacccgaggtta 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tacttacccttctcttgaccatatttgcattggtgtttctattatatgtaatagaggtta 260
Query: 61 tttttattttaaggaaattaacctttactcagagcctattatcagtactgttcttccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttttattttaaggaaattaacctttactcagagcctattatcagtactgttcttccagc 320
Query: 121 tgttactggctatttaagtcaagtcatacttggaactcacagatgttttccatctttatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttactggctatttaagtcaagtcatacttggaactcacagatgttttccatctttatg 380
Query: 181 ttgctaaatttattagtcggcagtctgtggctgaatggttaggaaagctgtttacaccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgctaaatttattagtcggcagtctgtggctgaatggttaggaaagctgtttacaccca 440
Query: 241 tttgtgtcctctctttctttgttatcatgatggagtgaggccagcttgactg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgtgtcctctctttctttgttatcatgatggagtgaggccagcttgactg 492
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
