Query= MSMg01no320_k17.b1 MSMg01no320_k17.b1 CHROMAT_FILE:
MSMg01no320_k17.b1 PHD_FILE: MSMg01no320_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:14 2005
(343 letters)
>mm_chr14_80606526_80607269
Length = 744
Score = 627 bits (324), Expect = 0.0
Identities = 339/344 (98%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 1 caactttgcacatgcacattggtaatctgattacttcctcatcttcaccctctcatctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caactttgcacatgcacattggtaatctgattacttcctcatcttcaccctctcatctcc 260
Query: 61 ctgccatgcttatcaaccccggccccatccctacccgtgctttccccagattcataact- 119
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgccgtgcttatcaacccctgccccatccctacccgtgctttccccagattcataactc 320
Query: 120 ttttgttttgtcttgtggcccatttggtgtagccaggaccatctgggtgagcattgggtt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgttttgtcttgtggcccatttggtgtagccaggaccatctgggtgagcattgggtt 380
Query: 180 ggaactgcccattggaacctggacatataatttgtgggtatacaatggacagcaatgatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaactgcccattggaacctggacatataatttgtgggtatacaatggacagcaatgatt 440
Query: 240 ctttcagtccctggatctatcagtcataaatagttcagcagtgggaggtaggtccccctc 299
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 ctttcagtccctggatctatcagtcacaaatagttcagcagtgggaggtaggtccccctc 500
Query: 300 agccatgcctccctccagccatgtctgattgttggctgaaccat 343
|||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 501 agccatgcctccctccagccgtgtctgattgttggctgaaccat 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 744
Length adjustment: 9
Effective length of query: 334
Effective length of database: 735
Effective search space: 245490
Effective search space used: 245490
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no320_k17.g1 MSMg01no320_k17.g1 CHROMAT_FILE:
MSMg01no320_k17.g1 PHD_FILE: MSMg01no320_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:14 2005
(660 letters)
>mm_chr14_80694906_80695968
Length = 1063
Score = 1241 bits (642), Expect = 0.0
Identities = 656/662 (99%), Gaps = 3/662 (0%)
Strand = Plus / Minus
Query: 1 tggagtaaaagcaaacaatgataaataaatgtgaagaagaataatgacagccactgtgag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 662 tggagtaaaagcaaacaatgataaataaatgtgaagaagaataatgacaggcactgtgag 603
Query: 61 gagaaacaaggcaggatgtggggttgcaatgtgataaacagtgctaatttcaattaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gagaaacaaggcaggatgtggggttgcaatgtgataaacagtgctaatttcaattaggtg 543
Query: 121 caccaggtggaaaactgacacctaagcaggggccccaaataagaaaaatttaagagaatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 caccaggtggaaaactgacacctaagcaggggccccaaataagaaaaatttaagagaatt 483
Query: 181 tcccaagcagaagggtgaatgaagttcttgaattctagggagaaactttattgcaggatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tcccaagcagaagggtgaatgaagttcttgaattctagggagaaactttattgcaggatg 423
Query: 241 gagcaggaagtgctcatgagaatcaggcaaggagaggtgcaac---agatcagaagttgc 297
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 422 gagcaggaagtgctcatgagaatcaggcaaggagaggtgcaacagaagatcagaagttgc 363
Query: 298 cagaagctgggcctttggaccttacaagttgtggataagatgatgattacagtcataatt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cagaagctgggcctttggaccttacaagttgtggataagatgatgattacagtcataatt 303
Query: 358 ggttctgagaacatccaatgcgctaggtacggcagctttccctgatttatttcagttaag 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggttctgagaacatccaatgcgctaggtacggcagctttccctgatttatttcagttaag 243
Query: 418 gaaagaatgttaatttgcatacagaatttctttgctccaacctgtaggggtggtgctgat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 242 gaaagaatgttaatttgcatacagaatttctttgctccaacctgtaggggtggtgatgat 183
Query: 478 gctgtcctgatccccaattggttctgtcagtaaagaagccatgggccaattgctggacag 537
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 182 gctgtcctgatccccaattggttctgtcagtaaagaaaccatgggccaattgctggacag 123
Query: 538 aaggaacaggtccctggagtcaaagagagatgcaaggaaagagaagagagtttgccaggc 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaggaacaggtccctggagtcaaagagagatgcaaggaaagagaagagagtttgccaggc 63
Query: 598 ttcagagtgagaaaaaccaaaaggccgtgtgagatcccaggaagagtagcaacctgtggc 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttcagagtgagaaaaaccaaaaggccgtgtgagatcccaggaagagtagcaacctgtggc 3
Query: 658 tg 659
||
Sbjct: 2 tg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1063
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1053
Effective search space: 684450
Effective search space used: 684450
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
