Query= MSMg01no321_f02.b1 MSMg01no321_f02.b1 CHROMAT_FILE:
MSMg01no321_f02.b1 PHD_FILE: MSMg01no321_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:02 2005
(636 letters)
>mm_chr14_104831262_104832296
Length = 1035
Score = 1114 bits (576), Expect = 0.0
Identities = 618/632 (97%), Gaps = 1/632 (0%)
Strand = Plus / Minus
Query: 5 gaattcagggagaatgttactacatcatcttatgctgttggataatgtgaaatcaaatat 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gaattcagggagaatgttaatacatcatcttatgctgttggataatgtgaaatcaaatat 776
Query: 65 gctttgctatttccaggcaattcatttgtgggcctcaggaagggcttggtcatctcagcc 124
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 775 gctttgctatttccagg-aattcttttgtgggcctcaggaagggcttggtcatctcagcc 717
Query: 125 tgatggttgaaccctttggcgaagtggtgtgactggctccagccagttctatctccttag 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct: 716 tgatggttgaaccctttggggaagtggtgtgactggctccagccagttctatctcctgag 657
Query: 185 catctccctactctcaattagctagaaagtaaagataaagaagttgtccatcattctgaa 244
|||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 656 catctccctactctcaattagctagaaagtaaggagaaagaagttgtccatcattctgaa 597
Query: 245 agaaactgtcttctctgggcaccttggatctttctctctattccctcttcctcttcattt 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 596 agaaactgtcttctctgggcaccttggatctttctctctattccctctttctcttcattt 537
Query: 305 tggtattgattggtgtctcattgggttttaataattaggaccttagagataaatgagctt 364
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tggtattgattggtgtttcattgggttttaataattaggaccttagagataaatgagctt 477
Query: 365 ccttggtaattagctggatattttcttggtagttactagcaaatcatctaaggatacata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 ccttggtaattagctggatattttcttggtagttactagcaaatcatctaaggatacata 417
Query: 425 aaacattacagtacaacctcaataagttgtaatattcagggagtggttaactgatttaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaacattacagtacaacctcaataagttgtaatattcagggagtggttaactgatttaag 357
Query: 485 ctgtagaaaacgtagacacttttatatttgaaaaagatagatgcttgtatacctgtattt 544
||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 356 ctgtagaaattgtagacacttttatatttgaaaaagacagatgcttgtatacctgtattt 297
Query: 545 aatttttgcatagctttcccatttgtggctaatattattaagttatagtaggtcattgaa 604
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 296 aatttttgcatagctttcccatttgtggctaatattaataagttatagtaggtcattgaa 237
Query: 605 gcacacaaacattacatgtaatatagaaagtg 636
|||||||||||||||||||||||||| |||||
Sbjct: 236 gcacacaaacattacatgtaatataggaagtg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1035
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1025
Effective search space: 641650
Effective search space used: 641650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_f02.g1 MSMg01no321_f02.g1 CHROMAT_FILE:
MSMg01no321_f02.g1 PHD_FILE: MSMg01no321_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:02 2005
(350 letters)
>mm_chr14_104702969_104703718
Length = 750
Score = 656 bits (339), Expect = 0.0
Identities = 345/347 (99%)
Strand = Plus / Plus
Query: 1 tttctaatgtctaaatctctttatgttagaaacaagcaaaattcaagggtcctctgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctaatgtctaaatctctttatgttagaaacaagcaaaattcaagggtcctctgtttt 260
Query: 61 tgtaaacttgacccagtattcatgcacagtaattgggggaacaaaaatagaacaaaaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtaaacttgacccagtattcatgcacagtaattgggggaacaaaaatagaacaaaaaca 320
Query: 121 aagcctgactatttgttactcagccgtctgtctttaaaggagtctcaatatctgtgagtc 180
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcctgactattcggtactcagccgtctgtctttaaaggagtctcaatatctgtgagtc 380
Query: 181 agattagcctaggatagagatggtggtgctgaatcagctcacaattccaaaggctcaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agattagcctaggatagagatggtggtgctgaatcagctcacaattccaaaggctcaggg 440
Query: 241 attgtgacaactggatttaattctcattcatatgacagagcctatgagcaaagtaattat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgtgacaactggatttaattctcattcatatgacagagcctatgagcaaagtaattat 500
Query: 301 tcagttctaagctccaagtcaacaggagtatcatatccactgaagca 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagttctaagctccaagtcaacaggagtatcatatccactgaagca 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
