Query= MSMg01no322_h14.b1 MSMg01no322_h14.b1 CHROMAT_FILE:
MSMg01no322_h14.b1 PHD_FILE: MSMg01no322_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:27 2005
(318 letters)
>mm_chr14_122008186_122008905
Length = 720
Score = 555 bits (287), Expect = e-162
Identities = 308/315 (97%), Gaps = 2/315 (0%)
Strand = Plus / Plus
Query: 5 gaattcttccttttccca-tggcatcggcaaattcaaaggaatatagtgttcatggttgc 63
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttccttttccaaatggcatcggcaaattcaaaggaatatagtgttcatggttgc 264
Query: 64 acaccacgcggagacactcaaacttgtactcaaagagagtctgcaggaagaaatgcttag 123
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 acaccacgcggagaaactcaaacttgtactcaaagagagtctgcaggaagaaatgcttag 324
Query: 124 atgtgaaaacctcaccggatgttgtatctaga-tgctagtaaacctactggaagcaaaga 182
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 acgtgaaaacctcaccggatgttgtatctagaatgctagtaaacctactggaagcaaaga 384
Query: 183 gcatgagcacttagtggggaccacgtgcttgtgtctttatgtatgttggatggcttacag 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcatgagcacttagtggggaccacgtgcttgtgtctttatgtatgttggatggcttacag 444
Query: 243 gcatttgtgtgaaaaccaaacacacttcattatttaatgcctttagcagactttaaggca 302
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 gcatttgtgtgaaaaccaaacacacttcattaaataatgcctttagcagactttaaggca 504
Query: 303 gttattatttatgct 317
|||||||||||||||
Sbjct: 505 gttattatttatgct 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 720
Length adjustment: 9
Effective length of query: 309
Effective length of database: 711
Effective search space: 219699
Effective search space used: 219699
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_h14.g1 MSMg01no322_h14.g1 CHROMAT_FILE:
MSMg01no322_h14.g1 PHD_FILE: MSMg01no322_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:27 2005
(283 letters)
>mm_chr14_122179696_122180378
Length = 683
Score = 513 bits (265), Expect = e-150
Identities = 277/281 (98%)
Strand = Plus / Minus
Query: 3 ctgtgttaggctgtcacatgctgcagagccattccttgatacttacagaagttttccttc 62
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 483 ctgtgttaggctgtcacatgctgcagagccattccttgatacttaaagaagttttccttc 424
Query: 63 accacaagaggaatcgacagtaaaggaaaaaaatcaggaaacgtattggcatctcaacag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 accacaagaggaatcgacagtaaaggaaaaaaatcaggaaacgtattggcatctcaacag 364
Query: 123 tgagaccgtggaagtggaaaatgaaagatcttcatgagcagggatgatggggaggcctag 182
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 363 tgagaccgtggaagtggaaaatgaaagatcttcatgagcagggacgatggggaggcctag 304
Query: 183 ctgggaccctcagcaagctgcctggtcctgatgtcatacttcctgtcggggctccgtgac 242
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 303 ctgggaccctcagcaagctgcctggtcctgatgtcacacttcctgtcggggctccgtgac 244
Query: 243 ccttcttggcctgcctctctctgggcctgccttagacctag 283
||||| |||||||||||||||||||||||||||||||||||
Sbjct: 243 ccttcgtggcctgcctctctctgggcctgccttagacctag 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
