Query= MSMg01no322_h16.b1 MSMg01no322_h16.b1 CHROMAT_FILE:
MSMg01no322_h16.b1 PHD_FILE: MSMg01no322_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:27 2005
(188 letters)
>mm_chr14_69992378_69992965
Length = 588
Score = 317 bits (164), Expect = 2e-91
Identities = 178/184 (96%), Gaps = 4/184 (2%)
Strand = Plus / Plus
Query: 7 gaattctagtgattccc--actgacaggaaggggacacactggtgtgtgctaaaatttcc 64
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctagtga--ccctgactgacaggaaggggacacactggtgtgtgctaaaatttcc 264
Query: 65 aagagacaaagggtgcccctttggagtccttggcagagggctgatgcttattgaatcatt 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagagacaaagggtgcacctttggagtccttggcagagggctgatgcttattgaatcatt 324
Query: 125 acgtttgcattacattggtttatgtgaatgtgggtgtgtgcacataccacagaatacatg 184
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acgtttgcattacattgctttatgtgaatgtgggtgtgtgcacataccacagaatacatg 384
Query: 185 cgga 188
||||
Sbjct: 385 cgga 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no322_h16.g1 MSMg01no322_h16.g1 CHROMAT_FILE:
MSMg01no322_h16.g1 PHD_FILE: MSMg01no322_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:27 2005
(225 letters)
>mm_chr14_70168023_70168647
Length = 625
Score = 364 bits (188), Expect = e-105
Identities = 210/222 (94%), Gaps = 8/222 (3%)
Strand = Plus / Minus
Query: 1 ggcagaaggggaaaggcccgattctaggcccttcagggcccctttactctttttaagccc 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 385 ggcagaaggggaaaggcccgattctaggctcttcagggcccctttactctttttaagccc 326
Query: 61 agtaagttgcagagtccaagaaactggaaaaagtacagtcagtgatgtgacgcggaaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtaagttgcagagtccaagaaactggaaaaagtacagtcagtgatgtgacgcggaaatt 266
Query: 121 gaacagaactttctggcagctaaagctaacaccaggtttggcttcctttcctgcctggaa 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 gaacagaactttctggcagctaaagctaacaccaggcaaggcttcctttcctgcctggaa 206
Query: 181 agggaatggcagatgtccagcagctagggagggtctccaccc 222
||| |||||||||||||||||||||||||||||||
Sbjct: 205 agg--------gatgtccagcagctagggagggtctccaccc 172
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 225
Length of database: 625
Length adjustment: 9
Effective length of query: 216
Effective length of database: 616
Effective search space: 133056
Effective search space used: 133056
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
