TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCATCGCCTGTCTGGTCGTGTTTTCCTGCAATTCTTTAAGGGATTT
TTGTGCTTCCTCTTTAAGGTCTTCTATGCGTTTAGCAGTGTTCTCCTGTA
TGTCTTTAAGTAAGTTATTAAAGTCCTTCTTGATGTCCTCTACCATCATC
ATGAGATAAGCTTTTAGATCCAGGTCTATCTTTTCGGGTGTGTTGGGGTT
CCCAGGACTGGGTGGGGTGGGAGTGCTGTGTTCTGATGATAGTGAGTCGT
CTTGGTTTCTGTTAGTAAGATTCTTACTTTTGCCTTTCACCATCTGGTAA
TCTCTGGGTTAATTGTTATAGTTGTCTCTGGTTAGAGCTTGTTCCTCAGG
CGATTATGTTAGCCTTTATCAGCAAACCTGGGAGACTAACTCTCTCCTGA
GTTTCAGTTGTCAGAGTACTCTCTGCAGGCAAGTTCTCCTCTTGCAGGGA
AGGTGCCCAGATATCTGGTGTTCGAACCTGCCTTCTGGCAGAAGTTGTGT
TGCACTCACCAGAGGTCCTAAGATCCTGTGGAGAGTCCTGTGTGGACCTT
GGGGTGTCTGCAGACTCTGCCCCCAAGGTGCCTCAGTGCTGGCGCAGACC
GGAGGGCCAAACATAAATTTCTTAAAGAAACACTAATTATCGGCCAATAT
GAAAATGTTGAGCTAAATGTACACCCAAAAAAAAAATTTT

NCGAATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGACATTCCAGGCGTATTGCT
TGTAGCAGCCTGCCAAGTCACTAAGCACACAAGCCTGCTTATGGCAGAGT
GTTTGTTTCAATATTTAGCATCATATTCTTAAATGGAGCAGAAGGACCAG
ATGGAGAACACAAGCAACTTGGCAGGTATTTTAACCAGTGTCTATGAAAA
ACAATGATACAAGCTTGGCAGAGTATAGGGTGATCAACCATGAGGACATA
ACACTCATACAGGTATGACTTAGTAATGCCTAAATGAGACTATTAAATTT
TTATGATTATAGTAAAATAGCATAAAATAATATTTATTTAGCTTATAAGA
CTGAAGGTCAATGCTTGAGTCTTGGCTTGACCAAGAGGTTAATTTTCTTA
TTCTTGGCTCATTTACATCACCAGCTCTCAACTGGAGTGAGAGTCATTAG
ACTGTTGTACATCTCTTACCCACCAGCAAACTAATCTTTGCATCCCCGAG
TAGCAAGGCATCGGAAGACAAAAGAAACAAAAGAAGCCAAGTAAACAAAT
AAACAACAAATCTAAAAGTTCCATATGGCTGATCTATGCCTCACAGAGGA
AGCTGTTTTGCCAAAAAGAGGATGGAGCCCGTGCTCTAGATGAAATGTGG
GGAGGAATTTGGGGAGAACAATGCTTTGTCAACTCGGAGG

Query= MSMg01no324_d19.g1 MSMg01no324_d19.g1 CHROMAT_FILE:
MSMg01no324_d19.g1 PHD_FILE: MSMg01no324_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:30 2005
         (545 letters)



>mm_chr14_106449376_106450320
          Length = 945

 Score =  978 bits (506), Expect = 0.0
 Identities = 536/546 (98%), Gaps = 1/546 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcgacattccaggcgtattgcttgtagcagcctgccaagtcactaagcacacaagcctg 60
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttcgacattccaggcatattgcttgtagcagcctgccaagtcactaagcacacaagcctg 259

                                                                       
Query: 61  cttatggcagagtgtttgtttcaatatttagcatcatattcttaaatggagcagaaggac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cttatggcagagtgtttgtttcaatatttagcatcatattcttaaatggagcagaaggac 319

                                                                       
Query: 121 cagatggagaacacaagcaacttggcaggtattttaaccagtgtctatgaaaaacaatga 180
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 320 cagatggagaacacaagcaacttggcaggtatttcaaccagtgtctatgaaaaacaatga 379

                                                                       
Query: 181 tacaagcttggcagagtatagggtgatcaaccatgaggacataacactcatacaggtatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tacaagcttggcagagtatagggtgatcaaccatgaggacataacactcatacaggtatg 439

                                                                       
Query: 241 actta-gtaatgcctaaatgagactattaaatttttatgattatagtaaaatagcataaa 299
           ||||| ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 440 acttaagtaatgcctaaatgagactattaaatttttatgatcataataaaatagcataaa 499

                                                                       
Query: 300 ataatatttatttagcttataagactgaaggtcaatgcttgagtcttggcttgaccaaga 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 500 ataatatttatttagcttataagactgaaggtcaatgcttgagtcttggcttgaccaaca 559

                                                                       
Query: 360 ggttaattttcttattcttggctcatttacatcaccagctctcaactggagtgagagtca 419
           |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggttcattttcttattcttggatcatttacatcaccagctctcaactggagtgagagtca 619

                                                                       
Query: 420 ttagactgttgtacatctcttacccaccagcaaactaatctttgcatccccgagtagcaa 479
            |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctagactgtcgtacatctcttacccaccagcaaactaatctttgcatccccgagtagcaa 679

                                                                       
Query: 480 ggcatcggaagacaaaagaaacaaaagaagccaagtaaacaaataaacaacaaatctaaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggcatcggaagacaaaagaaacaaaagaagccaagtaaacaaataaacaacaaatctaaa 739

                 
Query: 540 agttcc 545
           ||||||
Sbjct: 740 agttcc 745


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)