Query= MSMg01no325_h11.b1 MSMg01no325_h11.b1 CHROMAT_FILE:
MSMg01no325_h11.b1 PHD_FILE: MSMg01no325_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:58 2005
(639 letters)
>mm_chr14_119014179_119015217
Length = 1039
Score = 1131 bits (585), Expect = 0.0
Identities = 621/635 (97%), Gaps = 4/635 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttatgccaatatcttctgagtgcatcggatgcatactcggtgcatggccttt 64
||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 gaattcatttaagtaaatatcttctgagtgcatcggatgcatactcggtgcatggccttt 979
Query: 65 ctggggtcagcacataaaacagaggagatctggattatcaggatgcggccgcagcttcgc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 ctggggtcagcacataaaacagaggagatctggattatcaggatgcggccgcagcttcgc 919
Query: 125 tcagtattggatggctgaaatctctatggtgctggggctgtattactgccaatggttttt 184
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 918 tcagtattggatggctgaaacctctatggtgctggggctgtattactgccaatggtt--- 862
Query: 185 gtttgtttgtttgtttgtttattaattgataactgattaatgattgattgattgaggctg 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 -tttgtttgtttgtttgtttattaattgataactgattaatgattgattgattgaggctg 803
Query: 245 gatctcaaaatacgcacaatggcctcaaacttgtatccaaggaaaattttgattgtcttg 304
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 802 gatctcaaaatacgcacaatggcctcaaacttgtatccaaggaaaactttgattgtcttg 743
Query: 305 cctctgtgtccctcgtgctgagcttataggcatgcaccagtgtgaccagcagaaaccatt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 cctctgtgtccctcgtgctgagcttataggcatgcaccagtgtgaccagcagaaaccatt 683
Query: 365 agttatacgacatagttcatgtagtattctcaatggcatatagccagcattgccattagg 424
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 agttatactacatagttcatgtagtattctcaatggcatatagccagcattgccattagg 623
Query: 425 agcaaggccatttgggagggcaggctgtcacaacctatttctgtaagctttgtttgtttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 agcaaggccatttgggagggcaggctgtcacaacctatttctgtaagctttgtttgtttg 563
Query: 485 tttgttagtaaacatcactttactgtggccagtggtgctgtttctgttttgctttcttgt 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tttgttagtaaacatcactttactgtggccagtggtgctgtttctgttttgctttcttgt 503
Query: 545 tttagctgcagtgtctagtgaccttttatatgagaagctgatgcttgtcaaaccgctggg 604
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 502 ttaagctgcagcatctagtgaccttttatatgagaagctgatgcttgtcaaaccgccggg 443
Query: 605 ctgggcagagcccggaacttggtttaattctgtgc 639
|||||||||||||||||||||||||||||||||||
Sbjct: 442 ctgggcagagcccggaacttggtttaattctgtgc 408
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_h11.g1 MSMg01no325_h11.g1 CHROMAT_FILE:
MSMg01no325_h11.g1 PHD_FILE: MSMg01no325_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:09:58 2005
(656 letters)
>mm_chr14_118859555_118860613
Length = 1059
Score = 1141 bits (590), Expect = 0.0
Identities = 633/658 (96%), Gaps = 19/658 (2%)
Strand = Plus / Plus
Query: 2 acaagtctcagtgactggctgagttgactctgtccactctgagtggctctgctgcccatt 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 acaagtctcagtgactggctgagttgactctgtccactctgagtggctctgctgcccatt 277
Query: 62 tcccgtgtgattttgaggttttttgttttttgttttgttttggttttttgctttgttttg 121
||||||||||||||||||||||| | ||||| |||||||| |||||
Sbjct: 278 tcccgtgtgattttgaggtttttgggttttt---ttgttttg-------------ttttg 321
Query: 122 ttttgttattattgttatttttggtttccttaactacggctcaggtgcttcctgcaaaga 181
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttttgttattgttgttatttttggtttccttaactacggctcaggtgcttcctgcaaaga 381
Query: 182 gagatct---aggcctttatcttagaaagctgcatatttaaaaatgcatccccaaaaaca 238
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gagatcttctaggcctttatcttagaaagctgcatatttaaaaatgcatccccaaaaaca 441
Query: 239 tgacatgaagaggcaaactggaaggcttcattttcatcaaagaaatatggagtcaattgt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgacatgaagaggcaaactggaaggcttcattttcatcaaagaaatatggagtcaattgt 501
Query: 299 aattttccctttgtgttaagaaagggatattatttttgtcctctgcttaattagaagtgg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aattttccctttgtgttaagaaagggatattatttttgtcctctgcttaattagaagtgg 561
Query: 359 ctgggtgcatctcatctgattttctttctctaaaaattgcctcgggattaaaagcggatg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ctgggtgcatctcatctgattttctttctctaaaaattgcctcgggattaaaagcggatg 621
Query: 419 tggaaagatgtttctcagagttaagatttgagaacagttatggcaccttaatgtttactt 478
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 622 tggaaagatgtttctcagagttaagatttgggaacagttatggcaccttaatgtttactt 681
Query: 479 ctttgcacacaataattaaaaatgtagatgcctgtgttgatatacttcaaatgttcacat 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ctttgcacacaataattaaaaatgtagatgcctgtgttgatatacttcaaatgttcacat 741
Query: 539 ggactgtctcatggatgtgagtctactgggaatcctggtccttaatgtttatcagaattt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ggactgtctcatggatgtgagtctactgggaatcctggtccttaatgtttatcagaattt 801
Query: 599 ctctcccctgatgcaagtgatctgcaaatccctcagttttcaggtttgactacaaaaa 656
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 802 ctctcccctgatgcaagtgatctgcaaaaacctcagttttcaggtttgactacaaaaa 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1059
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1049
Effective search space: 677654
Effective search space used: 677654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
