Query= MSMg01no325_l23.b1 MSMg01no325_l23.b1 CHROMAT_FILE:
MSMg01no325_l23.b1 PHD_FILE: MSMg01no325_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:18 2005
(519 letters)
>mm_chr14_77554958_77555876
Length = 919
Score = 949 bits (491), Expect = 0.0
Identities = 512/519 (98%)
Strand = Plus / Minus
Query: 1 tccgtgttgcagttgtcatgctcttcttggcaggaatcctcaagagcgggttagggtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 tccgtgttgcagttgtcatgctcttcttggcaggaatcctcaagagcgggttagggtttg 660
Query: 61 cacttttgcctgccctccaagacttgcacagcgcccctgtacactgtgtgttctctataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 cacttttgcctgccctccaagacttgcacagcgcccctgtacactgtgtgttctctataa 600
Query: 121 atgttgaatgaatgacattgttttctagcttcacatatcctgaaggcagaaactcagatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 atgttgaatgaatgacattgttttctagcttcacatatcctgaaggcagaaactcagatg 540
Query: 181 ctgggaatgtcattaccatcccactaggcttacttgatttaaatgtatgccagttccctg 240
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 539 gtgggaatgtcattaccatcccactaggcttgcttgatttaaacgtatgccagttccctg 480
Query: 241 tgtgaaagactattttccccctcgggctgccaggccccagtgcaaagaaggaacatagga 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tgtgaaagactatttttcccctcgggctgccaggccccagtgcaaagaaggaacatagga 420
Query: 301 gaagactgacccattgtgcaaatttaccaaaagattcacgaaaagagcactcagaaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gaagactgacccattgtgcaaatttaccaaaagattcacgaaaagagcactcagaaagga 360
Query: 361 acttggtggtataatctgcctgagcgaaggataaagatcctggggacacctaaccttctc 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 359 acttggtggtataatctgcctgagcaaaggataaagatcctggggacacctaaccttctc 300
Query: 421 aaaaaaggtccaagtcaccgagttgcagatacttggcagtttctacactcccttctacag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aaaaaaggtccaagtcaccgagttgcagatacttggcagtttctacactcccttctacag 240
Query: 481 aaaaggataggatagggggtgttaaatctgtctgcctct 519
|||||||||||| ||| ||||||||||||||||||||||
Sbjct: 239 aaaaggataggaaaggaggtgttaaatctgtctgcctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_l23.g1 MSMg01no325_l23.g1 CHROMAT_FILE:
MSMg01no325_l23.g1 PHD_FILE: MSMg01no325_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:19 2005
(640 letters)
>mm_chr14_77373037_77374077
Length = 1041
Score = 1178 bits (609), Expect = 0.0
Identities = 633/641 (98%), Gaps = 1/641 (0%)
Strand = Plus / Plus
Query: 1 ctcatgatttatacagacactaaataacagatgatcaactaccagcttttatcatgtatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcatgatttatacagacactaaataacagatgatcaactaccagcttttatcatgtatt 260
Query: 61 attcctgaccacagagaacagcacttagaagactccattaattctctcaagcctgggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attcctgaccacagagaacagcacttagaagactccattaattctctcaagcctgggaag 320
Query: 121 gatgcagtcactgcctcaactgcctgcagccactccatctgtcctctgcccttgtctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgcagtcactgcctcaactgcctgcagccactccatctgtcctctgcccttgtctgtt 380
Query: 181 cttcccagttagcctcaagttttaccaacagtgagacttgcaggaaatcatctcacctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 cttcccagttagcctcaagttttaccaacagtgagacttgcaggaaatcatctcatctgg 440
Query: 241 gagcagctgaacctgtttgaagcagagagactagttaaccagattacagttgcctaagac 300
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagtagctgaacctggaagaagcagagagactagttaaccagattacagttgcctaagac 500
Query: 301 tgtttgactctgtttatgcctcacactatctccccctttatcttcctcctctaatcccat 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtttgactctgtgtatgcctcacactatctccccctttatcttcctcctctaatcccat 560
Query: 361 ggatattcccaaggctaaagatgctccttctccagttcctttctactataaccaaactga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggatattcccaaggctaaagatgctccttctccagttcctttctactataaccaaactga 620
Query: 421 ataaattcctttattatttcacaactcctctctctgattagactctcaagatgctgagtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataaattcctttattatttcacaactcctctctctgattagactctcaagatgctgagtg 680
Query: 481 gccagcctggtccatcaggcacccctagaagtaagatttctgatgtagtactgatacaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gccagcctggtccatcaggcacccctagaagtaagatttctgatgtagtactgatacaaa 740
Query: 541 caggaaatagaaattggcagtatttggggagggggccctgaaagaaa-cagtattttatt 599
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 741 caggaaatagaaattggcagtatttggggagggggccctgaaagaaaacagtattttatt 800
Query: 600 tgctaaaagccaaaactccttggacctgtctttgtcgaatg 640
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 801 tgctaaaagccaaaactccttggacctgtctttgttgaatg 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1041
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1031
Effective search space: 649530
Effective search space used: 649530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
