Query= MSMg01no326_i04.b1 MSMg01no326_i04.b1 CHROMAT_FILE:
MSMg01no326_i04.b1 PHD_FILE: MSMg01no326_i04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:14 2005
(257 letters)
>mm_chr14_93955089_93955745
Length = 657
Score = 466 bits (241), Expect = e-136
Identities = 250/253 (98%), Gaps = 2/253 (0%)
Strand = Plus / Plus
Query: 6 ggaattcccaccttcc-tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgcgt 64
|||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 206 ggaattcccacc-tccttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgt 264
Query: 65 gtgcgtgtgcgtgtgcgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaatat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtgcgtgtgcgtgtgcgtgtgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaatat 324
Query: 125 gagagagagagagagagagagagagagagattcctataacatttccctgccagttgagga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagagagagagagagagagagagagagagattcctataacatttccctgccagttgagga 384
Query: 185 atataaaacctgaaatctctatctttctgtatcctgtgcagtttcatggctctgggaaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atataaaacctgaaatctctatctttctgtatcctgtgcagtttcatggctctgggaaat 444
Query: 245 gaggtatcagaga 257
|||||||||||||
Sbjct: 445 gaggtatcagaga 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 103
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 257
Length of database: 657
Length adjustment: 9
Effective length of query: 248
Effective length of database: 648
Effective search space: 160704
Effective search space used: 160704
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no326_i04.g1 MSMg01no326_i04.g1 CHROMAT_FILE:
MSMg01no326_i04.g1 PHD_FILE: MSMg01no326_i04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:14 2005
(637 letters)
>mm_chr14_94106889_94107925
Length = 1037
Score = 1232 bits (637), Expect = 0.0
Identities = 637/637 (100%)
Strand = Plus / Minus
Query: 1 acagtagaattggcattgggggctatcatcctgatagctgaacaaattgtgatgtgaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 acagtagaattggcattgggggctatcatcctgatagctgaacaaattgtgatgtgaatt 778
Query: 61 ttgatctattcctcttgcagattttgatagaatataacaattatcatgttataccctgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ttgatctattcctcttgcagattttgatagaatataacaattatcatgttataccctgta 718
Query: 121 ttaatttctgatgatgttaatatggagctgaatataataaagactcagattgtggagagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 ttaatttctgatgatgttaatatggagctgaatataataaagactcagattgtggagagc 658
Query: 181 tatttttaaccacttatctaagccaatgctcattattttactttcccttccttacagaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tatttttaaccacttatctaagccaatgctcattattttactttcccttccttacagaat 598
Query: 241 taagcaatgtttttgttacacaataatgagtattcacctattgtgtgagtctataatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 taagcaatgtttttgttacacaataatgagtattcacctattgtgtgagtctataatttt 538
Query: 301 agtaacaacatatttttgtctcatatcttacaggagagactgatgtttccctcatggttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 agtaacaacatatttttgtctcatatcttacaggagagactgatgtttccctcatggttc 478
Query: 361 ttacaatagaatgtatatattaatgcatgtaaaacacatgctttatgctatgacagaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ttacaatagaatgtatatattaatgcatgtaaaacacatgctttatgctatgacagaaat 418
Query: 421 tctttccacatactagtcttaaaattttatcacactattatcaatggtctcctctcaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tctttccacatactagtcttaaaattttatcacactattatcaatggtctcctctcaaaa 358
Query: 481 attgtaaattaaacactaaaattggcatcacctttatgcagcaacattagatgtttcctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 attgtaaattaaacactaaaattggcatcacctttatgcagcaacattagatgtttcctc 298
Query: 541 attcttctcatcccatactcaggtgacctccttggtaatcttttacataccactcaaatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 attcttctcatcccatactcaggtgacctccttggtaatcttttacataccactcaaatt 238
Query: 601 caccgagtctttccacgtctacttcaattggcttgct 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 caccgagtctttccacgtctacttcaattggcttgct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
