Query= MSMg01no326_k03.b1 MSMg01no326_k03.b1 CHROMAT_FILE:
MSMg01no326_k03.b1 PHD_FILE: MSMg01no326_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:22 2005
(495 letters)
>mm_chr14_22257600_22258494
Length = 895
Score = 866 bits (448), Expect = 0.0
Identities = 481/492 (97%), Gaps = 1/492 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaagatatatcctatagagtgtcttagattattctgcttcagga-aaaaaaaaa 63
||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 837 gaattcaaagatagataatatagagtgtcttagattattctgcttcaggagaaaaaaaaa 778
Query: 64 tctgtatccgaagaaatcaagaaatgattcctggaggaggtgtcatgaacagagccttgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 tctgtatccgaagaaatcaagaaatgattcctggaggaggtgtcatgaacagagccttgg 718
Query: 124 tgggtgctgtgagagatggacattatatacagaagaaaatagggaagcattagagcaaag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tgggtgctgtgagagatggacattatatacagaagaaaatagggaagcattagagcaaag 658
Query: 184 tccatgttggagaacaatataagatcagtggtattgaaggcacggcaagccaagcaacaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tccatgttggagaacaatataagatcagtggtattgaaggcacggcaagccaagcaacaa 598
Query: 244 ggagagcatttgaagctttgtgctgtgatatggtctcatactgctgcgctctgattacag 303
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 597 ggagagcatttgaaggtttgtgctgtgatatggtctcatactgctgcgctctgattatag 538
Query: 304 gacctccagttaggcaattttggcagaagtaaagagaaaatgttaccagagagattcagc 363
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gacctccagttaggcgattttggcagaagtaaagagaaaatgttaccagagagattcagc 478
Query: 364 agaggcccccccaccatcctaggatgcttcttagagcgctgtgcttggaacagtggcttc 423
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 agaggcccctggagcatcctaggatgcttcttagagcgctgtgcttggaacagtggcttc 418
Query: 424 tgtatcacacatgcccaccacagacctactctgagttcccgtttatagttcaattgtgca 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tgtatcacacatgcccaccacagacctactctgagttcccgtttatagttcaattgtgca 358
Query: 484 aagtatttaagg 495
||||||||||||
Sbjct: 357 aagtatttaagg 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_k03.g1 MSMg01no326_k03.g1 CHROMAT_FILE:
MSMg01no326_k03.g1 PHD_FILE: MSMg01no326_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:22 2005
(522 letters)
>mm_chr14_22093501_22094421
Length = 921
Score = 986 bits (510), Expect = 0.0
Identities = 519/522 (99%), Gaps = 1/522 (0%)
Strand = Plus / Plus
Query: 1 caaatggttggggagccataaaaaaccttttaagaagtagaggaatataaggctgtgttt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaatggttggg-agccataaaaaaccttttaagaagtagaggaatataaggctgtgttt 259
Query: 61 gagagttcttattcccttatgctaatgaattcagctccatattgaaggataattagtaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gagagttcttattcccttatgctaatgaattcagctccatattgaaggataattagtaca 319
Query: 121 caaatatctccagctagtctttagtttcttactacatttagtttggaaatatattgaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 caaatatctccagctagtctttagtttcttactacatttagtttggaaatatattgaaag 379
Query: 181 acatgtaaattagtgacttcctcattgctatttattctgcaattcagtttttcttggtgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acatgtaaattagtgacttcctcattgctatttattctgcaattcagtttttcttggtgt 439
Query: 241 ctttattttgtttttatttattgtttattttagttatatacttctgaggcagaaagactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ctttattttgtttttatttattgtttattttagttatatacttctgaggcagaaagactg 499
Query: 301 gcctcaaccttgctaccatttgccacagcctcccaaggaaccaacactgctaggcagatg 360
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 500 gcctcaaccttgctaccatttgccacagcctcccaaggaactaaaactgctaggcagatg 559
Query: 361 tagttagtatttatagcatcatgtgttccttattggttttcacagaagcagctttcgagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tagttagtatttatagcatcatgtgttccttattggttttcacagaagcagctttcgagt 619
Query: 421 tctcccttcccacccagcccaccccaaccctgtgccaaacaacaactcagatttgctctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tctcccttcccacccagcccaccccaaccctgtgccaaacaacaactcagatttgctctc 679
Query: 481 actttacactttgctaataattcctgccaaagtctgggttgt 522
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 actttacactttgctaataattcctgccaaagtctgggttgt 721
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 921
Length adjustment: 10
Effective length of query: 512
Effective length of database: 911
Effective search space: 466432
Effective search space used: 466432
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
