Query= MSMg01no329_a13.b1 MSMg01no329_a13.b1 CHROMAT_FILE:
MSMg01no329_a13.b1 PHD_FILE: MSMg01no329_a13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:21 2005
(363 letters)
>mm_chr14_78916414_78917176
Length = 763
Score = 640 bits (331), Expect = 0.0
Identities = 354/369 (95%), Gaps = 12/369 (3%)
Strand = Plus / Plus
Query: 7 gaattcttaactactgaccacccttcttcagagactgagttttatctctttaaaatataa 66
||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 gaattcttagctactgaacacccttcttcagagactgagttttatctctttaaaatataa 254
Query: 67 gtttactttttccaaagatattgtagtaagctttcaaagagtttatgcaggtttaaggaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gtttactttttccaaagatattgtagtaagctttcaaagagtttatgcaggtttaaggaa 314
Query: 127 agctagctttcttttctgtta------------ccttttctttaaaagcattttttccag 174
||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 315 agctagctttcttttctgttaccttttcttttgccttttctttaaaagcattttttccag 374
Query: 175 cacaaggctccctccagtctttgcccccgaagaatagaggcttcgtacaggtggtcctgt 234
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 cacaaggttccctccagtctttgcccccgaagaatagaggcttcgtacaggtggtcctgt 434
Query: 235 ctaagctcctgagggccagagaaggtgtgctgtttgttttgtttttgaaagaatgtcact 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ctaagctcctgagggccagagaaggtgtgctgtttgttttgtttttgaaagaatgtcact 494
Query: 295 ctgtaggtgaagctggcctggaactatgcagcccacgctagactctaactcacagtgaca 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 ctgtaggtgaagctggcctggaactatgcagcccacgctagactctaactcacagtgaca 554
Query: 355 ctcctgcat 363
|||||||||
Sbjct: 555 ctcctgcat 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 363
Length of database: 763
Length adjustment: 9
Effective length of query: 354
Effective length of database: 754
Effective search space: 266916
Effective search space used: 266916
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_a13.g1 MSMg01no329_a13.g1 CHROMAT_FILE:
MSMg01no329_a13.g1 PHD_FILE: MSMg01no329_a13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:21 2005
(359 letters)
>mm_chr14_79091789_79092547
Length = 759
Score = 671 bits (347), Expect = 0.0
Identities = 356/359 (99%)
Strand = Plus / Minus
Query: 1 aaaaaaggatgtttattttaatgatgacattcagtaaatatgctgccagttgtcagcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 aaaaaaggatgtttattttaatgatgacattcagtaaatatgctgccagttgtcagcact 500
Query: 61 taggaacggttgagcaaaatagaaaacaaaaataaacaagcaaatatcaagatgaaagaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 499 taggaacggttgagcaaaatagaaaacaaaaataaacaagcaaatatcaaaatgaaagaa 440
Query: 121 acaaaacaaactactaaggagagaatgagatcttgcctgaaggaacttgcaaattaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acaaaacaaactactaaggagagaatgagatcttgcctgaaggaacttgcaaattaaatc 380
Query: 181 cagagttgatctgcccagagtgatctgccctgttgtgacagaaggaaggtggtgacacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cagagttgatctgcccagagtgatctgccctgttgtgacagaaggaaggtggtgacacca 320
Query: 241 ggaagtggcaataagatgggagaggacagggccacacctttcctttagtgccctgcaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggaagtggcaataagatgggagaggacagggccacacctttcctttagtgccctgcaggc 260
Query: 301 gggccacccttcctttctgttttattcctctgtgatactcagatggacaaaccacactg 359
||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 259 gggccacccttcctttctgttttattcgtctgtgatactcagatggagaaaccacactg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
