Query= MSMg01no329_k22.b1 MSMg01no329_k22.b1 CHROMAT_FILE:
MSMg01no329_k22.b1 PHD_FILE: MSMg01no329_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:14 2005
(366 letters)
>mm_chr14_107698268_107699033
Length = 766
Score = 675 bits (349), Expect = 0.0
Identities = 358/361 (99%)
Strand = Plus / Plus
Query: 4 ggaattctctaaaacattatcttaacaacataaaagtacagatttcatgttttgattgag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctctaaaacattatcttaacaacataaaagtacagatttcatgttttgattgag 263
Query: 64 gaatatctcagagtacaagttagtttatatcttataatatgttgtataacagtttaaaat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gaatatctcagagtacaagttagtttatatcttataatatgttgtataacagtttaaaat 323
Query: 124 caaaagtatgtacattttaagtcactcaatgaactgtactccgtaaaatgatgattccaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caaaagtatgtacattttaagtcactcaatgaactgtactccgtaaaatgatgattccaa 383
Query: 184 atttaattaagtaatagttacatgtatcctttcatatgaaaatttaatacctattttata 243
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 384 atttaattaagtaatagttacatgtatccttttatatgaaaatttaatacctattttata 443
Query: 244 taatgaaagagattttgaaacctgaaggcaaaaaattttttgaagggaatcattatttga 303
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 444 taatgaaagagattttgaaacctgaaggcaaaaatttttttgaagggaatcattatttga 503
Query: 304 ggagacttctactgagacaatacattttacttgttccttcttgtgggcgtgtagatgtga 363
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 504 ggagacttctactgagacaatacattttccttgttccttcttgtgggcgtgtagatgtga 563
Query: 364 g 364
|
Sbjct: 564 g 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 366
Length of database: 766
Length adjustment: 9
Effective length of query: 357
Effective length of database: 757
Effective search space: 270249
Effective search space used: 270249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_k22.g1 MSMg01no329_k22.g1 CHROMAT_FILE:
MSMg01no329_k22.g1 PHD_FILE: MSMg01no329_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:14 2005
(348 letters)
>mm_chr14_107878786_107879533
Length = 748
Score = 619 bits (320), Expect = 0.0
Identities = 332/336 (98%), Gaps = 1/336 (0%)
Strand = Plus / Minus
Query: 9 gatccaaagagaagaaaactttcaattacagcttcaatatttgttaattttcagaaatat 68
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 473 gatccaaagagaagaaaactttcagttacagcttcaatatttgttaattttcagaaatat 414
Query: 69 cagggttgatgtagattatataaaaaaatgaagcagttctaaagaaaaggttaattatta 128
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cagggttgacgtagattatataaaaaaatgaagcagttctaaagaaaaggttaattatta 354
Query: 129 aattgaacttaaatttcaaatatttatgtttgactattttgaccatgtatgaaccgcttt 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 aattgaacttaaatttcaaatatttatgtttgactattttgaccatgtatgaaccgcttt 294
Query: 189 caatattagttgttaagccacaataaatatgaaaattttaaggcaatattaaatgatttc 248
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 293 caatattagttgttaagccacaataaatatgataattttaaggcaatattaaatgatttc 234
Query: 249 ttattttaatttgtgtgcaaatgtgtttttattgata-tttttaataattattttaagga 307
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 233 ttattttaatttgtgtgcaaatgtgtttttattgatattttttaataattattttaagga 174
Query: 308 agcatatggtgacatgatacagatgtcattgattcc 343
||||||||||||||||||||||||||||||||||||
Sbjct: 173 agcatatggtgacatgatacagatgtcattgattcc 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
