Query= MSMg01no329_n11.b1 MSMg01no329_n11.b1 CHROMAT_FILE:
MSMg01no329_n11.b1 PHD_FILE: MSMg01no329_n11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:26 2005
(533 letters)
>mm_chr14_23578337_23579271
Length = 935
Score = 971 bits (502), Expect = 0.0
Identities = 521/528 (98%), Gaps = 2/528 (0%)
Strand = Plus / Minus
Query: 5 gaattctcccagtgctaagaacagcagtgtcagctctgtgttcttgttactaaacaacca 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gaattctcccagtgataagaacagcagtgtcagctctgtgttcttgttactaaacaacca 673
Query: 65 tgtgacactgaaatgaggaagaaggaagccttaggcagacagcatagtgccacagcccag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tgtgacactgaaatgaggaagaaggaagccttaggcagacagcatagtgccacagcccag 613
Query: 125 atgttggagccaccatgctctgaaccccaaatctttcctctctgaacttatccatggatt 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 612 atgttggagccaccatgctctgaaccccaaatttttcctctctgaacttatccatggatt 553
Query: 185 atccctgccaccttgcccccctttaccccctggctgtttttctcagctggccaatgagag 244
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 552 atccctgccaccttgcccccctttacctgctggctgtttttctcagctggccaatgagag 493
Query: 245 aagcactttgggagagattaagtagttctcagagctgccatctgatggg--aaaaaaaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 492 aagcactttgggagagattaagtagttctcagagctgccatctgatgggaaaaaaaaaaa 433
Query: 303 tctccaagaatggttcaaaggagttagaactcctccaggcacaaaactaaatatgcacag 362
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 432 tctccaagaatggttcaaaggagttagacctcctccaggcacaaaactaaatatgcacag 373
Query: 363 taaagaaatttgaaaaatgcctgtccttgccatcccggtccctctgtgattgatggcaga 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 taaagaaatttgaaaaatgcctgtccttgccatcccggtccctctgtgattgatggcaga 313
Query: 423 gagggcttgctatgatcattttactctgacaggtcccaggcataaatcccacagagttgc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gagggcttgctatgatcattttactctgacaggtcccaggcataaatcccacagagttgc 253
Query: 483 tgctctcctctgacagccttctgagggctccagttaggaacaggaaac 530
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgctctcctctgacagccttctgagggctccagttaggaacaggaaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 935
Length adjustment: 10
Effective length of query: 523
Effective length of database: 925
Effective search space: 483775
Effective search space used: 483775
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_n11.g1 MSMg01no329_n11.g1 CHROMAT_FILE:
MSMg01no329_n11.g1 PHD_FILE: MSMg01no329_n11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:26 2005
(362 letters)
>mm_chr14_23499281_23500042
Length = 762
Score = 677 bits (350), Expect = 0.0
Identities = 359/362 (99%)
Strand = Plus / Plus
Query: 1 ccccctcattcattaatcatccctttgcctatttattcgggtggcaagtatagcgaacac 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 ccccctcattcattaatcatccctttgcctatttattcgggtggcaagtatagcgaacgc 260
Query: 61 acttagcgtgtgcttttgtttaggtggcaccctttgtgaggaccaaggcagagctaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttagcgtgtgcttttgtttaggtggcaccctttgtgaggaccaaggcagagctaatta 320
Query: 121 ttaactgcaaaaggaaggcaaaactctcagcaaagagccaaatgctgcacacaccaagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttaactgcaaaaggaaggcaaaactctcagcaaagagccaaatgctgcacacaccaagac 380
Query: 181 attgtatgtgcgtgtgtttcaaactttcagccaagcaactggggtagctttatttagctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgtatgtgcgtgtgtttcaaactttcagccaagcaactggggtagctttatttagctg 440
Query: 241 ggagttggggtgggggcgttgctggcagcctcataattaatagaggcagtctattaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagttggggtgggggcgttgctggcagcctcataattaatagaggcagtctattaaaac 500
Query: 301 ccaactgagcagacagttcagggactctgtgtatacccctgcacagcccagctggggtct 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 501 ccaactgagcagacagttcagggactctgtgtatacccctggacagcccagctggggcct 560
Query: 361 ca 362
||
Sbjct: 561 ca 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
