TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACCTAGACTCTTGAGTTTCTCTACTATGATGCTATGATAACTAGTT
CTTGTCTGTTTTCTTTTATAAGGCAATTAATACCTATAGACTGCTCATCC
ATTGAGTGACTGTTCACCAGGCAAATACAGGTGAAATAAATTGAACTTTT
TTTCAATAGAACTGTTTTAAAAAAAATCTTATCATAGTCTGAAACACAGA
TCCTCTGAGCTAGTCAGCATGCAGAGAAAAACAATCAAACAAGCAAGCAA
ACAAACAAACAAGACAAAAAAAAAACCCAAAAACAAAAACAAACCACTGG
AGTTCTCAGCCCTAAATCAGACATTCGTATTTTACCCAGGGCTCAGAGAT
TTTAAAAAGAGGGTACAAAGCTGGAAAATCCGGAGCTTGTAGATGACTTC
AAGGAAACAGCGTTTTCTAGACACAACAGGGCAGATGCATATATGATCTC
ACAGCATTTGAGGTGTATGAGCAAGAGCGGTCCAGGCTCCAGACAAACCA
AGTCCGAGCAAAGATGGGGGAAGCTGGATATGCGGTCACACCACCACATT
AAGTATATTAAATCAAGTGCTATTACCAAATGATAGCTGTTATGAGAGGA
TCGGTGTATTTATTTTTTTTACATGACGGGATCCACTGGTGGTGACCACA
CATCTAAACAGCTCCTGACTCT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCTACCTGGGAGGCTGATAAAGTCC
AAAACCCAACAGGAGCCTCCCCAGTGTACAGTGGAGCAGAAGCGGGCACC
CGAAACTCATCTGGAAGGGATTCATTAAAGAGAAGTGTATTTCCTATTAC
TATTTACAATAGCCACAGCTAGCCTTGATTCATTGTTTTTCTTCCTAGGG
TTTCAAAGTACTTAAATTACCATGATCAAAAGTTTAATGGTGAATTAATG
AGGGTGGTAACTGGGCTTTTTCTATGTGCTCTTGGTGCATGCTTAATAAT
ACAAATCAAGGCAACACTACTGGTAATTGGAGTAACTGAACATGAGACTA
GGAGGGAACCTTCAAGATTAACTGATTTACCTAAGGTCAGACAGCTAATT
GTAACAAACCCTGACTAGGATCCAGTCAATCAATTCTCCATTCAATATTT
GCTGCGTTGGTCACCTCTGAAGCATACTTCACTTTTAGTTATGCTTTCCA
CCCAATTCTATACTTGTGTGAAATACTCAGCTTCGGTACTTACACCATGC
AGCAACCTAGAATTTATCTCCTACGGCACAAGCTTAGAGAGTCACCACAG
ACCTTAGCTAGGGAATTTTCATTGTGTAAATCTGGACCTGATTACCTTGC
TAACAATCTTATTATAGAAAACN

Query= MSMg01no331_n09.b1 MSMg01no331_n09.b1 CHROMAT_FILE:
MSMg01no331_n09.b1 PHD_FILE: MSMg01no331_n09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:48 2005
         (552 letters)



>mm_chr14_99029279_99030230
          Length = 952

 Score =  824 bits (426), Expect = 0.0
 Identities = 432/434 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcacctagactcttgagtttctctactatgatgctatgataactagttcttgtctg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gaattcacctagactcttgagtttctctactatgatgctatgataactagttcttgtctg 375

                                                                       
Query: 65  ttttcttttataaggcaattaatacctatagactgctcatccattgagtgactgttcacc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttttcttttataaggcaattaatacctatagactgctcatccattgagtgactgttcacc 315

                                                                       
Query: 125 aggcaaatacaggtgaaataaattgaactttttttcaatagaactgttttaaaaaaaatc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 aggcaaatacaggtgaaataaattgaactttttttcaatagaactgttttaaaaaaaatc 255

                                                                       
Query: 185 ttatcatagtctgaaacacagatcctctgagctagtcagcatgcagagaaaaacaatcaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ttatcatagtctgaaacacagatcctctgagctagtcagcatgcagagaaaaacaatcaa 195

                                                                       
Query: 245 acaagcaagcaaacaaacaaacaagacaaaaaaaaaacccaaaaacaaaaacaaaccact 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 acaagcaagcaaacaaacaaacaagacaaaaaaaaaacccaaaaacaaaaacaaaccact 135

                                                                       
Query: 305 ggagttctcagccctaaatcagacattcgtattttacccagggctcagagattttaaaaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ggagttctcagccctaaatcagacattcgtattttacccagggctcagagattttaaaaa 75

                                                                       
Query: 365 gagggtacaaagctggaaaatccggagcttgtagatgacttcaaggaaacagcgttttct 424
           ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  gagggtagaaagttggaaaatccggagcttgtagatgacttcaaggaaacagcgttttct 15

                         
Query: 425 agacacaacagggc 438
           ||||||||||||||
Sbjct: 14  agacacaacagggc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 952
Length adjustment: 10
Effective length of query: 542
Effective length of database: 942
Effective search space:   510564
Effective search space used:   510564
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no331_n09.g1 MSMg01no331_n09.g1 CHROMAT_FILE:
MSMg01no331_n09.g1 PHD_FILE: MSMg01no331_n09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:48 2005
         (524 letters)



>mm_chr14_98848879_98849802
          Length = 924

 Score = 1013 bits (524), Expect = 0.0
 Identities = 524/524 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctacctgggaggctgataaagtccaaaacccaacaggagcctccccagtgtacagtgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctacctgggaggctgataaagtccaaaacccaacaggagcctccccagtgtacagtgga 260

                                                                       
Query: 61  gcagaagcgggcacccgaaactcatctggaagggattcattaaagagaagtgtatttcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagaagcgggcacccgaaactcatctggaagggattcattaaagagaagtgtatttcct 320

                                                                       
Query: 121 attactatttacaatagccacagctagccttgattcattgtttttcttcctagggtttca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attactatttacaatagccacagctagccttgattcattgtttttcttcctagggtttca 380

                                                                       
Query: 181 aagtacttaaattaccatgatcaaaagtttaatggtgaattaatgagggtggtaactggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtacttaaattaccatgatcaaaagtttaatggtgaattaatgagggtggtaactggg 440

                                                                       
Query: 241 ctttttctatgtgctcttggtgcatgcttaataatacaaatcaaggcaacactactggta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttttctatgtgctcttggtgcatgcttaataatacaaatcaaggcaacactactggta 500

                                                                       
Query: 301 attggagtaactgaacatgagactaggagggaaccttcaagattaactgatttacctaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attggagtaactgaacatgagactaggagggaaccttcaagattaactgatttacctaag 560

                                                                       
Query: 361 gtcagacagctaattgtaacaaaccctgactaggatccagtcaatcaattctccattcaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcagacagctaattgtaacaaaccctgactaggatccagtcaatcaattctccattcaa 620

                                                                       
Query: 421 tatttgctgcgttggtcacctctgaagcatacttcacttttagttatgctttccacccaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatttgctgcgttggtcacctctgaagcatacttcacttttagttatgctttccacccaa 680

                                                       
Query: 481 ttctatacttgtgtgaaatactcagcttcggtacttacaccatg 524
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctatacttgtgtgaaatactcagcttcggtacttacaccatg 724


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space:   469796
Effective search space used:   469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)