TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACCAAAATACGCG
GAATTCAATTAAAATATGTCCCAGACAATATGCAAAAATGCTATGATCTG
ACTCAAAATTTCTCAAGAGTTCCTTTAATAAAAATCTAAACTTCCTTAGT
TCTGCTGACCAAACTCTAACCATCTGCTTCAGAATCTCTCCACGCTTCTC
CCTGCCCATGCTCTGCCTGACCATTTTCTGACAAACAACCTAGGTTGTCT
GTCGTACAGCTAATTCCTTACTTCTTAAGTTTCCATTCCTCATTTGTTGC
TTCAAGAAAGTTCACATGCCAATATTTTATGGGGTATCTTAACTGTATTT
GTCAATGTCAGTGCATATAAATCTGAACTACTTTTCCAAACTAGAGCAGA
CTCCACACAATAACCTCTAACTTCTTTATGGCCGTTACTCAGATATGCTT
CTCCAGTAGCAATTCCCATAGTCTGCACACACTGATCAAGGAGAAATAGA
GGATAGAGAAGATCTTGAAACAGTTGATATGACAACACTAACAACAGGTA
TGTGCTTTGTGCACATGCTGTGTAGAACCCTGCAATAAAAGTAGACAAGT
CTACTTTCAAAATTATTTTTAGGGGAATGCATAAGAAAGAGTGAACAAAC
TATGTAAAAGAAAGGATACAAACTGGCATGAAACCTAAGAGTAAACATGC
TTGTATCATTATGAGGGGGAAACTTCTAA

CATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAGGCTGTTCCCTACTTTCTTTCCTATC
AGATTCAGTGTATCTTGTTTTATGTTGAAGTCTTTTATACATGGTGTTCG
AATAGGATGCAGGCTGTTATTTCAATTTTCTTGTGTCCATTGAGACTTCC
TTAGTGTCCAAGAGTGTGGATAATTTTGAATAAAATTATATGAAGTGCAT
AGAAGAAGCTGTATTATTTGGTGTTTGAGTGAAATGTTATGAAAATATCT
GCTAGGCCCACTAGGTATGTAGTGTCAATTGTCTCCAGCCTTTCTCTAGT
TAGGTTTCTGTCTGATGACTTATCTATTGATGAGAGTGTGCAATTGGCAT
CTTCTACTGCCAGTGTGTGAGGCCCAGGTTTAAGCTGTAGTGATGTTGCT
TGTACAAACTTGGGCACCCTTGTGTTGGGATCATAAATGTTAAGAATACA
ATGCTCTCTTGCTAGAGTTTTCTTTTGTTGAGTATGTAGTGTCCTTCTCT
TACTCTTCTGATTAGTTTTGGCATGAAGTCTATTTTTTTGGGGGGAGCGT
CAGATAGTAAAATGACTTCCACAGCTTGCTTCTTAGGTCCACTTACTTGG
AGTATCTTTTTTCATCCTTTATCCTAAGGTAAAGTCTATCCTTTACATTA
AAGTGTGTTTCTCCAGTCCAGCAGAA

Query= MSMg01no331_o22.b1 MSMg01no331_o22.b1 CHROMAT_FILE:
MSMg01no331_o22.b1 PHD_FILE: MSMg01no331_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:55 2005
         (680 letters)



>mm_chr14_106621579_106622658
          Length = 1080

 Score = 1201 bits (621), Expect = 0.0
 Identities = 663/677 (97%)
 Strand = Plus / Minus

                                                                       
Query: 2   gaattcaattaaaatatgtcccagacaatatgcaaaaatgctatgatctgactcaaaatt 61
           |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||
Sbjct: 878 gaattcaattaaaatatgtttcagacaatatgcaaaaatgctatgatctgactcaaaatt 819

                                                                       
Query: 62  tctcaagagttcctttaataaaaatctaaacttccttagttctgctgaccaaactctaac 121
           |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 818 tctcaacagttcctttaataaaaatctaaacttccttagttctgctgatcaaactctaac 759

                                                                       
Query: 122 catctgcttcagaatctctccacgcttctccctgcccatgctctgcctgaccattttctg 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 catctgcttcagaatctctccacgcttctccctgcccatgctctgcctgaccattttctg 699

                                                                       
Query: 182 acaaacaacctaggttgtctgtcgtacagctaattccttacttcttaagtttccattcct 241
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 698 acaaacaacctaggttgtctgtcgtacagctaatcccttacttcttaagtttccattcct 639

                                                                       
Query: 242 catttgttgcttcaagaaagttcacatgccaatattttatggggtatcttaactgtattt 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 catttgttgcttcaagaaagttcacatgccaatattttatggggtatcttaactgtattt 579

                                                                       
Query: 302 gtcaatgtcagtgcatataaatctgaactacttttccaaactagagcagactccacacaa 361
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 578 gtcaatgtcagtgcatataaatctgaactacttttccaaactagagcagaatccacacaa 519

                                                                       
Query: 362 taacctctaacttctttatggccgttactcagatatgcttctccagtagcaattcccata 421
           ||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 518 taacctctaacttctttgtggtctttactcagatatgcttctccagtagcaattcccata 459

                                                                       
Query: 422 gtctgcacacactgatcaaggagaaatagaggatagagaagatcttgaaacagttgatat 481
           |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 458 gtctacacacactgatcaaggagaaatagaggatagagaagatcttgagacagttgatat 399

                                                                       
Query: 482 gacaacactaacaacaggtatgtgctttgtgcacatgctgtgtagaaccctgcaataaaa 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gacaacactaacaacaggtatgtgctttgtgcacatgctgtgtagaaccctgcaataaaa 339

                                                                       
Query: 542 gtagacaagtctactttcaaaattatttttaggggaatgcataagaaagagtgaacaaac 601
           |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 338 gtagacaagtctactttcaagattatttttagggggatgcataagaaagagtgaacaaac 279

                                                                       
Query: 602 tatgtaaaagaaaggatacaaactggcatgaaacctaagagtaaacatgcttgtatcatt 661
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tatgtgaaagaaaggatacaaactggcatgaaacctaagagtaaacatgcttgtatcatt 219

                            
Query: 662 atgagggggaaacttct 678
           |||||||||||||||||
Sbjct: 218 atgagggggaaacttct 202


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1080
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1070
Effective search space:   716900
Effective search space used:   716900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)