Query= MSMg01no336_d05.b1 MSMg01no336_d05.b1 CHROMAT_FILE:
MSMg01no336_d05.b1 PHD_FILE: MSMg01no336_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:12 2005
(559 letters)
>mm_chr14_96126756_96127713
Length = 958
Score = 1036 bits (536), Expect = 0.0
Identities = 551/556 (99%), Gaps = 1/556 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatcacgtcacatcaggagagatggacaggaaatgtcagggttatcttgtattt 63
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcatcacg-caaatcaggagagatggacaggaaatgtcagggttatcttgtattt 262
Query: 64 tctgtgtatcatgggacatactaacgaactacatatcttttctgaagaaagtaatattta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tctgtgtatcatgggacatactaacgaactacatatcttttctgaagaaagtaatattta 322
Query: 124 tttatgtgaaaatgtcattccacctaaaaacaatatatatctctggcatatttttttggc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tttatgtgaaaatgtcattccacctaaaaacaatatatatctctggcatatttttttggc 382
Query: 184 ctcatcttgagaacttactgcattctcctgggagacagtgcattctttgggttttcaagc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctcatcttgagaacttactgcattctcctgggagacagtgcattctttgggttttcaagc 442
Query: 244 ctggtttaatagaaatacagaaaacaaaatccataaattaactattcttaaggcctagac 303
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 443 ctggtttaatagaaatacagaaaacgaaatccataaattaactattcttaaggcctagac 502
Query: 304 tttaaattactagacctgaaatatctgtagataggaagtctgagtcaaagaacagctgaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tttaaattactagacctgaaatatctgtagataggaagtctgagtcaaagaacagctgaa 562
Query: 364 aaaatacttatgatcataagaatatggaatttgaggcaaaataatttgttagcttcagtg 423
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 563 aaaatacttatgatcataagaatatggaatttgaggcaaaataatttattagcttcagtg 622
Query: 424 attcctaagctataataaaagtacttaataattacagatattgaatactcatttaaatat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 attcctaagctataataaaagtacttaataattacagatattgaatactcatttaaatat 682
Query: 484 gaatatgtgtgtgcatataggaggtaacttttctaccacttatttccttgtcatatgacg 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 683 gaatatgtgtgtgcatataggaggtaacttttctaccacttatttccttgtcatatgatg 742
Query: 544 aagggtacctttattg 559
||||||||||||||||
Sbjct: 743 aagggtacctttattg 758
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 559
Length of database: 958
Length adjustment: 10
Effective length of query: 549
Effective length of database: 948
Effective search space: 520452
Effective search space used: 520452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_d05.g1 MSMg01no336_d05.g1 CHROMAT_FILE:
MSMg01no336_d05.g1 PHD_FILE: MSMg01no336_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:12 2005
(544 letters)
>mm_chr14_96290655_96291600
Length = 946
Score = 630 bits (326), Expect = 0.0
Identities = 339/344 (98%), Gaps = 2/344 (0%)
Strand = Plus / Minus
Query: 1 aacgatatgctcaattatataaaccatttgaacctaaccagggctacatacactctgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aacgatatgctcaattatataaaccatttgaacctaaccagggctacatacactctgtct 485
Query: 61 agaaaaaaatgtcaaaagaaaaacagattactcaaatcttattatttccaaattattgtt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggaaaaaaatgtcaaaagaaaaacagattactcaaatcttattatttccaaattattgtt 425
Query: 121 tcctttttcttaatttgttacaacaaccttaaaatggctttatgcatataaagtt--gtg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 424 tcctttttcttaatttgttacaacaaccttaaaatggctttatgcatataaagttatgtg 365
Query: 179 tttacagatggtaatattggcaggtaggttaacttcactgtgtctcacaaaaataagcta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tttacagatggtaatattggcaggtaggttaacttcactgtgtctcacaaaaataagcta 305
Query: 239 gtggataattaagagacagtttactcattatgccccatgtattaaagaacaccaattaat 298
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 304 gtggataattaagagactgtttaatcattatgccccatgtattaaagaacaccaattaat 245
Query: 299 aaattttagtagaaatagtcacattctcatgtggaactcattct 342
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aaattttagtagaaatagtcacattctcatgtggaactcattct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 946
Length adjustment: 10
Effective length of query: 534
Effective length of database: 936
Effective search space: 499824
Effective search space used: 499824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
