AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTCATGTCTTTATATATTAAATTTAATCATGTTTGTTCTCAATTCT
TCTCAGTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGA
AAACCTTTCTTTCCAACAACACCCATCTTTGCATTTAGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGTTTGNTTGANAAAA
NAANTATNAGNAAATAAATATTGGATTTTAAATTTGATTATAAAATATAT
ATTTAAAAANATATATTTTTATTGTCATATAGGAAGAATATCTTTATATC
TCTCTCTATCTCTCTCTCTCTCTACTCACACTCTCCACTAAATCACTCTC
TCAGAGTCTGCAAGTCTTGCATGACATCGATTATTATTTTTTTAATAATC
TCATACTATCATAATCATTATATTGCAATTTTGAAATCCTCCACCATACT
TATTAATTCCATATACAAATTGTAGGCAATACACGCCCCACCCCACATCA
TTGTAACCCTTACTAAGNTCCTACTAATTTTTATCACCCTTTTTTAACCA
CACACCATTTTTAATAAAAACCGAAAAACAATCTTTGAAAAAAAACCATT
TTTTTTTACACCACCACCACTTTTTTTTTCACCCCCACCTACAACCTTTA
CTATACAACAACAAAAATATATCTTCCAATATTTCGAGTATATCTAAAAT
TCTTATCACAACCCCTTTTTTATTTA

ATATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTATAGAGAATATTGGTAATGTATTTCTCT
TTCTCAGGTGTAGTATGAGAAGAAAGAAGAAAGTGTGGATCAGTTTGCTT
GAAATGTGACTTTCCACAGACACTGTCCATCACAGATACAATAGCAAAGA
GGAGAAATGATCAAATGTATTTCTATTTCCTTTGCTTAGTTTTGAACATT
TTCCATCTTGTAGAGATTTCAAACATCTTTAAAATAAAGAAAAACATATA
TTCTTATCCAGAAATCTTTTACTGCCAGAAATGAAAAAAATAATAATAAT
TGTTTTTAACCAAAGTATACTTAGTAAAACTTTCAGGAAATGAACATCCA
GTGGTTGCAGGTTTTCATGAGACCCTTATTAATATATAAGATCTAATATA
TCTAGTCTTTCTATTTTATGGTGAAAGCTTAACAATATTATTATTTCATA
TAAATATTTAGGAAAATTTGTTTATCCAGTGACTGTAATCAAATAAGTCC
TACAAGAACCAGAAATTCATCATGCTAACACAGTCTGGAGATACTGAAAA
TTACTTTGAGAGATAATTTATATAAATAAACCCTATTTGTATTTTTTGCT
TAGNACATTTTTTTCTCTCTGTTCTATTGCATTCATATCATCAGTTTTGG
AAAGTTACTAAAAGGNACAGAATGAAGG

Query= MSMg01no336_m22.g1 MSMg01no336_m22.g1 CHROMAT_FILE:
MSMg01no336_m22.g1 PHD_FILE: MSMg01no336_m22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:59 2005
         (540 letters)



>mm_chr14_113070696_113071633
          Length = 938

 Score = 1025 bits (530), Expect = 0.0
 Identities = 537/540 (99%), Gaps = 2/540 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatagagaatattggtaatgtatttctctttctcaggtgtagtatgagaagaaagaagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tatagagaatattggtaatgtatttctctttctcaggtgtagtatgagaagaaagaagaa 679

                                                                       
Query: 61  agtgtggatcagtttgcttgaaatgtgactttccacagacactgtccatcacagatacaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 agtgtggatcagtttgcttgaaatgtgactttccacagacactgtccatcacagatacaa 619

                                                                       
Query: 121 tagcaaagaggagaaatgatcaaatgtatttctatttcctttgcttagttttgaacattt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 618 tagcaaagaggagaaatgatcaaatgtatttctatttcctttgcttagttttgaagattt 559

                                                                       
Query: 181 tccatcttgtagagatttcaaacatctttaaaataaagaaaaacatatattcttatccag 240
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 558 tccatcttgtagagatttcaaacatctttaaaataaagaaaaac--atattcttatccag 501

                                                                       
Query: 241 aaatcttttactgccagaaatgaaaaaaataataataattgtttttaaccaaagtatact 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaatcttttactgccagaaatgaaaaaaataataataattgtttttaaccaaagtatact 441

                                                                       
Query: 301 tagtaaaactttcaggaaatgaacatccagtggttgcaggttttcatgagacccttatta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tagtaaaactttcaggaaatgaacatccagtggttgcaggttttcatgagacccttatta 381

                                                                       
Query: 361 atatataagatctaatatatctagtctttctattttatggtgaaagcttaacaatattat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 atatataagatctaatatatctagtctttctattttatggtgaaagcttaacaatattat 321

                                                                       
Query: 421 tatttcatataaatatttaggaaaatttgtttatccagtgactgtaatcaaataagtcct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tatttcatataaatatttaggaaaatttgtttatccagtgactgtaatcaaataagtcct 261

                                                                       
Query: 481 acaagaaccagaaattcatcatgctaacacagtctggagatactgaaaattactttgaga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 acaagaaccagaaattcatcatgctaacacagtctggagatactgaaaattactttgaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 938
Length adjustment: 10
Effective length of query: 530
Effective length of database: 928
Effective search space:   491840
Effective search space used:   491840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)