Query= MSMg01no337_g17.b1 MSMg01no337_g17.b1 CHROMAT_FILE:
MSMg01no337_g17.b1 PHD_FILE: MSMg01no337_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:47 2005
(603 letters)
>mm_chr14_84850392_84851395
Length = 1004
Score = 1123 bits (581), Expect = 0.0
Identities = 596/601 (99%), Gaps = 2/601 (0%)
Strand = Plus / Plus
Query: 5 gaattcaataaattaatatctttggaaatgtaccacatttctctcatatttattat-aaa 63
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 204 gaattcaataaattaatatctttggaaatgtaccacatttctcttatatttattataaaa 263
Query: 64 atcataataaattagccagttgatgtgcct-cccccctcctcttttccctcaacaattgg 122
|||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 264 atcataataaattagccaattgatgtgcctcccccccttctcttttccctcaacaattgg 323
Query: 123 gcagtaatgcatattgtgctcaagtggaatgaaggaagtctgcaggaattccatagtctt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcagtaatgcatattgtgctcaagtggaatgaaggaagtctgcaggaattccatagtctt 383
Query: 183 gtatctagctcatttgttagcatttgcatcagtcggcctgccacttaaatatgctactaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtatctagctcatttgttagcatttgcatcagtcggcctgccacttaaatatgctactaa 443
Query: 243 tttcatgtctctttcttaaagtagactcgtattcccccaaatcaaattggatcaacagct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttcatgtctctttcttaaagtagactcgtattcccccaaatcaaattggatcaacagct 503
Query: 303 tgtagctctgggtcatcttcatttttcattttcttgcttagagttttgaaagtacatagt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtagctctgggtcatcttcatttttcattttcttgcttagagttttgaaagtacatagt 563
Query: 363 atagctttagaaatgggttaaaaatatttcatagttatgttgtaatactcatgtacaata 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atagctttagaaatgggttaaaaatatttcatagttatgttgtaatactcatgtacaata 623
Query: 423 aggagatatgaaatataggaactttggtgcagtatggctcacattatagctaaagtaaaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aggagatatgaaatataggaactttggtgcagtatggctcacattatagctaaagtaaaa 683
Query: 483 agtgattatagtctgtgagtgttttgatcacagggcccaaggttcatgcttcaagttttt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agtgattatagtctgtgagtgttttgatcacagggcccaaggttcatgcttcaagttttt 743
Query: 543 gtttaatctcaggtgtatacatattaacacagatatgtgaagagagattttatttttatt 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtttaatctcaggtgtatacatattaacacagatatgtgaagagagattttatttttatt 803
Query: 603 a 603
|
Sbjct: 804 a 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space: 589442
Effective search space used: 589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_g17.g1 MSMg01no337_g17.g1 CHROMAT_FILE:
MSMg01no337_g17.g1 PHD_FILE: MSMg01no337_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:47 2005
(519 letters)
>mm_chr14_85000410_85001328
Length = 919
Score = 951 bits (492), Expect = 0.0
Identities = 512/519 (98%)
Strand = Plus / Minus
Query: 1 tttgcttagctctataccccatgttttaatagggttatttgattttctggagtccatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tttgcttagctctataccccatgttttaatagggttatttgattttctggagtccatctt 746
Query: 61 cttaagttctttatatatattggataaatttatatatgttggataaagtgagcaaactca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cttaagttctttatatatattggataaatttatatatgttggataaagtgagcaaactca 686
Query: 121 gaagattgggctaattaattctgagccattttacagacatgcatataggagtatacttta 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 685 gaagattgggctaattaattctgagccattctacagacatgcatataggagtatacttta 626
Query: 181 ttttaaatgaagtaaattgcacaatcatgttcactatttggagttaatataccacttgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttttaaatgaagtaaattgcacaatcatgttcactatttggagttaatataccacttgaa 566
Query: 241 aaacataatttaaataaaatagcaccaacattaaattacgggagaactcaatgtagtagc 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 565 aaacataatttaaataaaatagcaccaacattaaattacgggggaactcaatgtagtagc 506
Query: 301 cttttgcaaatggactgctgcatcccatacctcaggctcttcatagattttgacatttat 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttttgcaaatggactgctacatcccatacctcaggctcttcatagattttgacatttat 446
Query: 361 ttttgagtaagggtgctagtcaggagtcaaagttcgaaattctactggcaagaacagcaa 420
|||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 445 ttttgagtaagggtgctagtcaggagtcaaaggtagaaattctactggcaagaacagcaa 386
Query: 421 ctaaaacttaataatattttacatctgaagctaanagcttttttactaagataaggtatt 480
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 385 ctaaaacttaataatattttacatctgaagctaaaagcttttttactaagataaggtatt 326
Query: 481 aaccttagatagatcaaagatcaaatacaaagcctagta 519
||||||||||||| |||||||||||||||||||||||||
Sbjct: 325 aaccttagatagaccaaagatcaaatacaaagcctagta 287
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
