Query= MSMg01no338_e22.b1 MSMg01no338_e22.b1 CHROMAT_FILE:
MSMg01no338_e22.b1 PHD_FILE: MSMg01no338_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:54 2005
(512 letters)
>mm_chr14_55400235_55401146
Length = 912
Score = 969 bits (501), Expect = 0.0
Identities = 507/509 (99%)
Strand = Plus / Plus
Query: 4 ggaattctccggaatgcgtttatcttcagaagcccaggatcgctctgctcggtgtaccgg 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctccggaaagcgtttatcttcagaagcccaggatcgctctgctcggtgtaccgg 263
Query: 64 gcggcggcttgctctggtcaggatttccctgcagccctcctaatgaaacagatcgcctcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gcggcggcttgctctggtcaggatttccctgcagccctcctaatgaaacagatcgcctcc 323
Query: 124 accttcccttaagtctcttctacgatgagggtaaaagtagttcttcttagctgagggagc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 accttcccttaagtctcttctacgatgagggtaaaagtagttcttcttagctgagggagc 383
Query: 184 ggaggaggagccgtgctcaggtactttcttgctcgccggctctggatcaggtttccacct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggaggaggagccgtgctcaggtactttcttgctcgccggctctggatcaggtttccacct 443
Query: 244 gctgcggtcgccccttccttctcgcccttgtcagctccgagctccgtgctcactccgcag 303
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 444 gctgcggtcgccccttccttctcgcccttgtcggctccgagctccgtgctcactccgcag 503
Query: 304 atcgctccatctgtgagggcagggtggctgctgcgctcgcgaatgtgcttccctttcggc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atcgctccatctgtgagggcagggtggctgctgcgctcgcgaatgtgcttccctttcggc 563
Query: 364 tgcggcgtttatttgcggaccgaggctccgccccccacctcctccatccttaagccgcat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgcggcgtttatttgcggaccgaggctccgccccccacctcctccatccttaagccgcat 623
Query: 424 ctcctccctcttcttctatttaattattagtaccccctacccccaaagatcacggaggaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctcctccctcttcttctatttaattattagtaccccctacccccaaagatcacggaggaa 683
Query: 484 ggggcttaaaacattttcttttcttttca 512
|||||||||||||||||||||||||||||
Sbjct: 684 ggggcttaaaacattttcttttcttttca 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_e22.g1 MSMg01no338_e22.g1 CHROMAT_FILE:
MSMg01no338_e22.g1 PHD_FILE: MSMg01no338_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:55 2005
(510 letters)
>mm_chr14_55537580_55538490
Length = 911
Score = 980 bits (507), Expect = 0.0
Identities = 510/511 (99%), Gaps = 1/511 (0%)
Strand = Plus / Minus
Query: 1 ccttcccctaa-actaacaagtggtccctctgcagggtgtggatacagctcagggttcta 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ccttcccctaacactaacaagtggtccctctgcagggtgtggatacagctcagggttcta 652
Query: 60 gacccctggataaagctttcccagtggatcctgaattgctggagaggggactggcggaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gacccctggataaagctttcccagtggatcctgaattgctggagaggggactggcggaac 592
Query: 120 ggaaggtaaacctggaggggcgtgctagagaaaatgaactggaacttagggggaacgggt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ggaaggtaaacctggaggggcgtgctagagaaaatgaactggaacttagggggaacgggt 532
Query: 180 attcttagccaagccatcggtgagacagggcgggcaggactaaatacatcggaagcaagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 attcttagccaagccatcggtgagacagggcgggcaggactaaatacatcggaagcaagg 472
Query: 240 acagagcagcgaggagctgtgagtcagcggaggtgctggaacatagaagggtctttgggg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 acagagcagcgaggagctgtgagtcagcggaggtgctggaacatagaagggtctttgggg 412
Query: 300 aattcaggaagacaggaaagactgctggaaggaagttgggtagccaggagagctgaaaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aattcaggaagacaggaaagactgctggaaggaagttgggtagccaggagagctgaaaga 352
Query: 360 atgtctgggcaatggatcaagggtggccaggtgacttctctccagcagtgaatttctggg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgtctgggcaatggatcaagggtggccaggtgacttctctccagcagtgaatttctggg 292
Query: 420 ttcctaagagactgactggctcctaagctggtctccaccagtgattaacctggggtgctg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ttcctaagagactgactggctcctaagctggtctccaccagtgattaacctggggtgctg 232
Query: 480 tagctattgctttctctttctggacctccaa 510
|||||||||||||||||||||||||||||||
Sbjct: 231 tagctattgctttctctttctggacctccaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 911
Length adjustment: 10
Effective length of query: 500
Effective length of database: 901
Effective search space: 450500
Effective search space used: 450500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
