Query= MSMg01no339_b03.b1 MSMg01no339_b03.b1 CHROMAT_FILE:
MSMg01no339_b03.b1 PHD_FILE: MSMg01no339_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:50 2005
(411 letters)
>mm_chr14_29467060_29467870
Length = 811
Score = 731 bits (378), Expect = 0.0
Identities = 399/410 (97%), Gaps = 8/410 (1%)
Strand = Plus / Plus
Query: 1 tttcagtccccacctcagcattttgacttctgatagtggagtcctataaatgatttcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcagtccccacctcagcattttgacttctgatagtggagtcctataaatgatttcttc 260
Query: 61 cacttgcctcggaccttactaaccatgaagagcctaggagtcatcctctggacaagactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacttgcctcggaccttactaaccatgaagagcctaggagtcatcctctggacaagactt 320
Query: 121 ttggacgggtttcgtacaaactcaattttaaaaatgacttcctaatgaggcagattttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttggacgggtttcgtacaaactcaattttaaaaatgacttcctaatgaggcagattttgc 380
Query: 181 tgaggaaaaggcactggtaagtcttgataaaatcttcagagttaaacattttagtaatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 tgaggaaaaggcactggtaagtcttgataaaatcttcagagttaaacattttagtaacac 440
Query: 241 ctggactttt----aagtgcatgtcacatgtgccagatggcaaaatctcatcaacaaatg 296
|||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctggac----ccagaagtgcatgtcacatgtgccagatggcaaaatctcatcaacaaatg 496
Query: 297 aaatggattctatggaatgggcccgattgactgattgagtgagagagtgagcgagtgaga 356
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 497 aaatggattctatggaatgggcccgattgactgagtgagtgagagagtgagtgagtgaga 556
Query: 357 gagtgagtgagtgagttagtgagtgagtgagttagtgagtgagtgagttg 406
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gagtgagtgagtgagttagtgagtgagtgagttagtgagtgagtgagttg 606
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_b03.g1 MSMg01no339_b03.g1 CHROMAT_FILE:
MSMg01no339_b03.g1 PHD_FILE: MSMg01no339_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:50 2005
(577 letters)
>mm_chr14_29646278_29647254
Length = 977
Score = 1058 bits (547), Expect = 0.0
Identities = 559/563 (99%)
Strand = Plus / Minus
Query: 15 tgaaccaccatgggcaagtctcaagggacaatggttggccaagatgttcccaaaggttgt 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 tgaaccaccatgggcaagtctcaagggacaatggttggccaagatgttcccaaaggttgt 918
Query: 75 cttcagttttagtttgtgattctaatttgccagctctaagtaatgggcccaatatcatgc 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 cttcagttttagtttgtgattctaatttgccagctctaagtaatgggcccaatatcatgc 858
Query: 135 agtgattgaatatctgcactaggatttggccctaaacactcttgcaatagtccgtgcttg 194
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 857 agtgattgaacatctgcactgggatttggccctaaacactcttgcaatagtccgtgcttg 798
Query: 195 tcagttttagtctatgctgtgtctacactgtgcctaatagctttgcccaggacaatcaag 254
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 tcagtttcagtctatgctgtgtctacactgtgcctaatagctttgcccaggacaatcaag 738
Query: 255 acagtttcctttgttgtcatttgtattttaagaactgcagttgttctcaaattcagacat 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 acagtttcctttgttgtcatttgtattttaagaactgcagttgttctcaaattcagacat 678
Query: 315 agaattcaacttgggagctcgtgggtgatgtggtctgtttaattaaaattctagaacaca 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 agaattcaacttgggagctcgtgggtgatgtggtctgtttaattaaaattctagaacaca 618
Query: 375 gagtcctccacagagtccttgctctggaaggcatcctggggtttcaaccctattcaaagt 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gagtcctccacagagtccttgctctggaaggcatcctggggtttcaaccctattcaaagt 558
Query: 435 atgggagtgtttacagcaacatttctcctgtaccgtgggctggcctataggcagcacttc 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atgggagtgtttacagcaacatttctcctgtaccgtgggctggcctataggcagcacttc 498
Query: 495 tactatcaagagacaatccattactctgatatctcttagaacaaaaccctgggtggccag 554
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 tgctatcaagagacaatccattactctgatatctcttagaacaaaaccctgggtggccag 438
Query: 555 tttccatagatttttttgaagcc 577
|||||||||||||||||||||||
Sbjct: 437 tttccatagatttttttgaagcc 415
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
