Query= MSMg01no340_h12.b1 MSMg01no340_h12.b1 CHROMAT_FILE:
MSMg01no340_h12.b1 PHD_FILE: MSMg01no340_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:29 2005
(624 letters)
>mm_chr14_78455879_78456902
Length = 1024
Score = 1156 bits (598), Expect = 0.0
Identities = 614/620 (99%), Gaps = 2/620 (0%)
Strand = Plus / Plus
Query: 5 gaattctttgttttgctctgagcccctttttttaatggggttatttgattttctggagtc 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctttgttcagctctgagcccctttttttaatggggttatttgattttctggagtc 266
Query: 65 taccttcttgagttctttatatatattggatattagtcccctatctgatttaggataggt 124
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 267 taccttcttgagttctttatatatgttggatattagtcccctatctgatttaggataggt 326
Query: 125 aaagatccttccccaatctgttggtggcctttttgtcttattgacggtgtcttttgcctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaagatccttccccaatctgttggtggcctttttgtcttattgacggtgtcttttgcctt 386
Query: 185 gcagaagctttgcaatttttcttttcttaaagacttttttttttaattgtatgaacattt 244
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 387 gcagaagctttgcaatttttcttttcttaaagactttttttt--aattgtatgaacattt 444
Query: 245 ccccttaagtggatcatgagtgtgtagtacctgctgaagccagaagagggcattaaatac 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 445 ccccttaagtggatcatgagtgtgtagtacctgctgaagccagaagagggcattaaatcc 504
Query: 305 cctagaactggaatacagatggttgtgagctgtcacattggtgccaggtactgaatactg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctagaactggaatacagatggttgtgagctgtcacattggtgccaggtactgaatactg 564
Query: 365 gtcttctgcaagaaaaagcaagtactctttaacgggtgagccatctctctatcccctaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtcttctgcaagaaaaagcaagtactctttaacgggtgagccatctctctatcccctaaa 624
Query: 425 ggtgtagcctaggctagcctccaattcgtgacccttctatctctgtgtcctcagcatatc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggtgtagcctaggctagcctccaattcgtgacccttctatctctgtgtcctcagcatatc 684
Query: 485 ttaaaggaacatagacccacaaccttccatatttctgattatgtccatcctgaacatccc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttaaaggaacatagacccacaaccttccatatttctgattatgtccatcctgaacatccc 744
Query: 545 tgagtgtgccattatgtatgggacatttcctattacttcctatgcatcagttatttgtag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tgagtgtgccattatgtatgggacatttcctattacttcctatgcatcagttatttgtag 804
Query: 605 gacagaagtggattttacaa 624
||||||||||||||||||||
Sbjct: 805 gacagaagtggattttacaa 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no340_h12.g1 MSMg01no340_h12.g1 CHROMAT_FILE:
MSMg01no340_h12.g1 PHD_FILE: MSMg01no340_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:29 2005
(223 letters)
>mm_chr14_78646223_78646845
Length = 623
Score = 273 bits (141), Expect = 7e-78
Identities = 159/165 (96%)
Strand = Plus / Minus
Query: 1 caaaccccagaatggctctctgctgcttagtttagcctctgtcacttccattaagagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 caaaccccagaatggctctctgctgcttagtttagcctctgtcacttccattaagagtta 258
Query: 61 tgagcttagagagaacactgtgtgttggtgtttgtgtgggcgtatgtgtgtgttggttat 120
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 257 tgagcttagagagaacagtgtgtgttggtgtttgtgtgtgcgtatgtgtgtgttggttat 198
Query: 121 gcatatatatatatatatatatatagatagatagatatagatata 165
||||||||||||||||||||||||| ||| ||| ||||| |||||
Sbjct: 197 gcatatatatatatatatatatatatatatatatatatatatata 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 223
Length of database: 623
Length adjustment: 9
Effective length of query: 214
Effective length of database: 614
Effective search space: 131396
Effective search space used: 131396
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
