MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-340K21
Chromosome	14 (Build37)
Map Location	73,729,836 - 73,730,259
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC668482, LOC675957, Fndc3a, LOC100043721, LOC100043723, LOC668487, LOC668489, Cysltr2, LOC100043149, Rcbtb2, Rb1, P2ry5
Downstream gene	Itm2b, LOC100043152, Med4, Nudt15, Sucla2, LOC100043734, EG629578, LOC629583
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668482 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668482
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	LOC675957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Fndc3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319448 MGI:1196463
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043721 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100043723 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043723
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC668487 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 1 Protein pseudo : _no_value

name	LOC668489 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins pseudo : _no_value

name	Cysltr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70086 MGI:1917336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043149 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Rcbtb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105670 MGI:1917200
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19645 MGI:97874
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	P2ry5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67168 MGI:1914418
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itm2b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16432 MGI:1309517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043152 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043152
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Med4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67381 MGI:1914631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nudt15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214254 MGI:2443366
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sucla2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20916 MGI:1306775
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043734 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 1756 ESTs, 6 Proteins

name	EG629578 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629578 MGI:3646710
definition	note : predicted gene, EG629578 pseudo : _no_value

name	LOC629583 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins pseudo : _no_value

name	LOC668482 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265666 GeneID:668482
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : similar to 3110045G13Rik protein transcript_id : XM_001479612.1

name	Fndc3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83745138 GeneID:319448 MGI:1196463
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibronectin type III domain containing 3a transcript_id : NM_207636.2

name	LOC100043721 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265791 GeneID:100043721
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100043721 transcript_id : XM_001480815.1

name	LOC100043723 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265793 GeneID:100043723
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : similar to polycomb group ring finger 5 transcript_id : XM_001480819.1

name	Cysltr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362508 GeneID:70086 MGI:1917336
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cysteinyl leukotriene receptor 2 transcript_id : NM_133720.2

name	Rcbtb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382149 GeneID:105670 MGI:1917200
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2 transcript_id : NM_134083.3

name	Rb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6677678 GeneID:19645 MGI:97874
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinoblastoma 1 transcript_id : NM_009029.1

name	P2ry5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388446 GeneID:67168 MGI:1914418
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : purinergic receptor P2Y, G-protein coupled, 5 transcript_id : NM_175116.3

name	Itm2b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892559 GeneID:16432 MGI:1309517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : integral membrane protein 2B transcript_id : NM_008410.2

name	Med4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129849 GeneID:67381 MGI:1914631
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mediator of RNA polymerase II transcription, subunit 4 homolog (yeast) transcript_id : NM_026119.3

name	Nudt15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371342 GeneID:214254 MGI:2443366
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nudix (nucleoside diphosphate linked moiety X)-type motif 15 transcript_id : NM_172527.2

name	Sucla2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381890 GeneID:20916 MGI:1306775
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : succinate-Coenzyme A ligase, ADP-forming, beta subunit transcript_id : NM_011506.2

name	LOC100043734 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265795 GeneID:100043734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 1755 ESTs, 6 Proteins product : similar to ribosomal protein S6, transcript variant 1 transcript_id : XM_001480836.1

name	LOC100043734 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149265797 GeneID:100043734
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1010 ESTs, 6 Proteins product : similar to ribosomal protein S6, transcript variant 2 transcript_id : XM_001480838.1

name	LOC668482 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265667 GeneID:668482
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479662.1

name	Fndc3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83745139 CCDS:CCDS27264.1 GeneID:319448 MGI:1196463
definition	codon_start : 1 note : fibronectin domain-containing protein 3a product : fibronectin type III domain containing 3a protein_id : NP_997519.2

name	LOC100043721 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265792 GeneID:100043721
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480865.1

name	LOC100043723 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265794 GeneID:100043723
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480869.1

name	Cysltr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526902 CCDS:CCDS27265.1 GeneID:70086 MGI:1917336
definition	GO_component : GO:0016020 - membrane [Evidence ISS] [Evidence IDA] GO_function : GO:0001631 - cysteinyl leukotriene receptor activity [Evidence IDA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004974 - leukotriene receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation product : cysteinyl leukotriene receptor 2 protein_id : NP_598481.1

name	Rcbtb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542383 CCDS:CCDS27266.1 GeneID:105670 MGI:1917200
definition	codon_start : 1 exception : mismatches in translation product : chromosome condensation 1-like protein_id : NP_598844.2

name	Rb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677679 CCDS:CCDS27267.1 GeneID:19645 MGI:97874
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005819 - spindle [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008134 - transcription factor binding [Evidence IPI]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0007050 - cell cycle arrest [Evidence IMP]; GO:0051301 - cell division [Evidence IMP]; GO:0000082 - G1/S transition of mitotic cell cycle [Evidence IMP]; GO:0008285 - negative regulation of cell proliferation [Evidence IMP]; GO:0045786 - negative regulation of progression through cell cycle [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA] [Evidence IGI]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI] [Evidence IDA] [Evidence IMP]; GO:0000074 - regulation of progression through cell cycle [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0051146 - striated muscle cell differentiation [Evidence IGI]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : retinoblastoma 1 protein_id : NP_033055.1

name	P2ry5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424718 CCDS:CCDS27268.1 GeneID:67168 MGI:1914418
definition	GO_function : GO:0045028 - purinergic nucleotide receptor activity, G-protein coupled [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : purinergic receptor (family A group 5) product : purinergic receptor P2Y, G-protein coupled, 5 protein_id : NP_780325.1

name	Itm2b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680502 CCDS:CCDS27269.1 GeneID:16432 MGI:1309517
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence TAS] GO_function : GO:0005524 - ATP binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence IMP] [Evidence IDA]; GO:0006917 - induction of apoptosis [Evidence IGI] codon_start : 1 note : integral membrane protein 2 B product : integral membrane protein 2B protein_id : NP_032436.1

name	Med4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385626 GeneID:67381 MGI:1914631
definition	GO_component : GO:0000119 - mediator complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : p36 TRAP/SMCC/PC2 subunit product : vitamin D receptor interacting protein protein_id : NP_080395.1

name	Nudt15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369730 CCDS:CCDS27270.1 GeneID:214254 MGI:2443366
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0008413 - 8-oxo-7,8-dihydroguanine triphosphatase activity [Evidence IDA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA] GO_process : GO:0009217 - purine deoxyribonucleoside triphosphate catabolism [Evidence IDA]; GO:0000302 - response to reactive oxygen species [Evidence IDA] codon_start : 1 note : MutT homolog 2 product : MTH2 protein protein_id : NP_766115.1

name	Sucla2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849708 CCDS:CCDS27271.1 GeneID:20916 MGI:1306775
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004775 - succinate-CoA ligase (ADP-forming) activity [Evidence IEA]; GO:0004774 - succinate-CoA ligase activity [Evidence ISS] GO_process : GO:0006099 - tricarboxylic acid cycle [Evidence IEA] codon_start : 1 product : succinate-Coenzyme A ligase, ADP-forming, beta subunit protein_id : NP_035636.1

name	LOC100043734 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265796 GeneID:100043734
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001480886.1

name	LOC100043734 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149265798 GeneID:100043734
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001480888.1

name	LOC675957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675957
definition	number : 3 pseudo : _no_value

name	LOC675957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675957
definition	number : 2 pseudo : _no_value

name	LOC675957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675957
definition	number : 1 pseudo : _no_value

name	LOC100043149 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043149
definition	number : 1 pseudo : _no_value

name	LOC100043149 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043149
definition	number : 2 pseudo : _no_value

name	LOC100043149 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043149
definition	number : 3 pseudo : _no_value

name	LOC100043152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043152
definition	number : 1 pseudo : _no_value

name	LOC100043152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043152
definition	number : 2 pseudo : _no_value

name	LOC100043152 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043152
definition	number : 3 pseudo : _no_value

name	LOC668487 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265668 GeneID:668487
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 ESTs, 1 Protein product : similar to Rnf26 protein pseudo : _no_value transcript_id : XR_034294.1

name	LOC668489 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265669 GeneID:668489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins product : similar to Gcsh protein pseudo : _no_value transcript_id : XR_034299.1

name	LOC629583 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149265671 GeneID:629583
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins product : similar to Nuclear autoantigenic sperm protein (histone-binding) pseudo : _no_value transcript_id : XR_034309.1

clone name	MSMg01-386K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-355G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139E03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-094F24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-447M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-455A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403F07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-122F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452L09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417E14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139I15
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-340K21.T7 (MSMg01no340_k21.b1)	MSMg01-340K21.TJ (MSMg01no340_k21.g1)
ACC	AG454659	AG454660
length	741	778
length of high quality (start - end)	485 (45 - 529)	426 (78 - 503)
definition	CHROMAT_FILE: MSMg01no340_k21.b1 PHD_FILE: MSMg01no340_k21.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:29:44 2005	CHROMAT_FILE: MSMg01no340_k21.g1 PHD_FILE: MSMg01no340_k21.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:29:44 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCTATCATTACTCTTCTATCCATAGTGCCCTTCCTCCTCTCTCCACTT CCTCCTCCCTACCTCCCCTTTCTCCCCACCTCACCCATGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGACAGCCACAAGCTAATATTAGTGTTTT CCTTAATCACACTCTACCTTCTCATGGCTATTTTTGAGACAGGGCCTCTC ACTGAACTGGAACCTTACAGATTTGGCTGGGCTGGATAACCCACCAACCC CAAGGATTCTATCTCAGCACTGGGATTACAGGTGTGCAAGACTACCTGGA TTTTTACATAGGTGCTGGGGGTCTGACTTCAGCCTTATGCTTGTGCAGCA AGCACTTTACCAACTGGGCTATTGTTCCCAGCCCCCACTGCATATATGCT TCTCATTTTTTAAAAAAAATATATATGTGTACAAATATTTTGTCTTCATG TATGTCTGTGTACCATATGCATGCCTGGTGCTCCCAGAGGTCAGAAGAAA CATCAGATCCTGTAGAACTGGAGTTATGAAGACGGTTGTGAACCACCCTG TGGAAGCTGAGAATCAAACACAATCCTCTATAAAAAAACAAAGTGCCCTT TATTGTTAAGTATTTCTCCACATGGAATTTCTTTTAAACCCTTAATAATT TCTGACCGGGAAAAATTTTTGCCCTTACTGGAAACCCTCTT	NCCGATGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXACTGTGTAGCCCATTGTCTCAAA TTCCTGGCAGTCCTCCTGCCTCAGCCTCCCAAGTGCTGGAATTATGCCCA GTTTAACAGTTTGTTTTTATTTCACTTTCCAAAAGTTCAAGACAATTGGA AGGTTTAAAGGAATGAACAGTTTCTGTGCAGAGAGTATGGGAAACAACTG GCCTCTGAAGAACTTCTGCTCTCTGCGGTGGACTCAGGATCAGGACTCAC GTCCCTTATGTGTGTACTTCTTAGATTCTTTCAGGTTTTGGGAAAGGAGA CCTGCTACTCTTATCTCCGTTACTAAAAGCTGGTGATGAGCTGGGATAGG GTAAAGGGACAAGAGCAAGGGCACAGGAGCCCTCTCTGCGTCCTCCTGTA CTCCTGTGATGACAGCGAGTGCTCAGCCAATCCCCCCACCCCTTCCTCCC CGTGCTGAATGTCATTCTTCATCTCTTTATAGACATTGTCCCCCTACCCA ACTCCCCCACCATGCCACCCGTTCACACACCTCAGTAAAAAAAAATAAGA ATTGATCCCTTCCAAGTTGTGGGTTTCCATCTGCAAGAACCGCTGCGGCA TTTCCAAGGGTCTAAAGAAAATGAAAAGAAAAAACCCCCGGTTTTAAATT TATAAAAAAGGCCACGCGGATTGGGGAACCCCCTTTATCCCACAACTTTG GAAGGAAAAAGAAAGGGGAATTTCTTAA
quality values	Open. Hide. 8 10 8 8 8 8 9 15 26 34 37 37 32 31 31 37 23 29 30 30 30 30 43 48 23 23 22 22 21 33 41 41 25 23 9 9 9 9 9 10 10 10 10 10 19 27 39 39 19 14 13 19 23 25 59 37 37 37 37 37 23 22 8 8 8 13 22 37 39 40 33 33 33 33 36 36 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 51 50 50 50 47 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 57 57 57 57 57 59 59 59 59 57 54 54 57 57 57 68 68 57 57 57 59 68 59 59 59 68 59 68 68 59 57 57 57 68 57 57 57 57 57 59 57 57 57 57 57 57 59 57 57 57 57 57 57 45 45 45 57 57 57 57 57 44 44 44 44 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 45 45 62 62 62 62 62 62 68 68 57 57 59 59 57 57 57 59 59 59 59 59 54 47 47 57 57 57 68 68 68 68 68 57 57 57 57 43 57 57 44 44 33 22 22 43 43 57 52 57 57 59 59 68 68 68 59 59 57 57 52 57 57 57 59 59 57 57 57 57 57 57 68 57 57 57 57 57 57 54 52 43 44 43 52 43 59 59 68 59 59 59 43 50 50 50 50 50 44 43 42 43 43 57 59 59 59 57 57 57 57 59 57 57 47 47 43 44 44 59 57 57 57 59 59 59 57 57 39 39 39 41 43 48 47 47 43 59 59 37 47 47 47 43 43 43 59 43 39 30 30 39 43 48 57 48 48 46 47 46 48 48 59 57 57 57 57 48 48 48 48 48 48 48 41 41 41 59 37 37 37 31 31 41 59 59 37 37 36 36 36 43 47 48 46 46 39 39 35 37 35 35 31 31 37 37 41 41 46 43 59 43 43 36 39 39 32 32 35 35 35 35 39 37 43 37 36 28 28 28 34 28 24 24 32 37 28 28 25 32 32 39 31 26 26 30 28 17 17 17 29 26 21 19 12 9 9 12 12 13 24 22 13 12 12 9 9 7 11 8 8 8 17 12 11 11 9 14 14 16 24 12 18 9 11 11 12 11 10 8 8 8 11 10 11 12 10 13 10 10 10 10 10 11 14 10 8 8 8 10 9 8 8 8 9 10 11 10 15 11 11 12 8 8 8 8 8 8 13 10 10 10 11 11 10 8 8 8 8 8 8 8 10 13 9 8 10 10 10 12 11 9 9 9 9 12 11 12 10 8 8 8 8 6 6 8 8 10 8 8 8 10 12 10 11 10 8 10 10 8 8 8 8 8 10 8 8 8 8 8 8 9 9 8 10 10 10 10 10 11 11 10 18 9 8 8 8 11 8 10 9 9 9 9 10 10 10 19 15 17 19 10 10 9 9 10 10 10 10 12 12 16 25 22 9 8 8 8 8 8 8 8 12 12 10 8 10 10 10 8 8 11 9 11 11 12 11 9 11 11 11	Open. Hide. 0 3 6 6 8 11 8 8 8 6 7 7 9 8 15 15 28 25 39 30 37 32 32 37 37 39 37 34 41 37 32 37 30 21 13 10 15 15 12 12 12 19 19 34 26 37 37 32 32 37 32 33 33 33 33 33 48 50 53 53 53 37 23 19 21 22 29 33 37 40 33 24 42 37 37 40 40 50 50 50 59 68 59 68 68 68 57 57 54 68 68 68 68 68 51 50 50 50 50 50 68 57 68 68 57 57 57 57 68 68 68 68 68 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 68 68 68 68 68 68 59 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 68 68 68 68 68 68 68 59 59 59 57 57 59 59 59 59 59 59 59 57 57 57 59 59 59 57 57 57 57 57 57 59 59 59 59 57 57 57 57 57 57 59 59 68 68 68 68 68 57 57 57 57 57 57 59 54 54 54 59 59 59 59 57 57 57 59 57 57 57 54 54 54 59 57 57 68 68 57 57 39 39 35 42 42 59 59 59 59 59 43 43 43 47 47 59 47 47 43 39 39 35 32 35 35 28 28 34 34 43 37 32 31 28 28 19 25 16 28 25 26 30 29 41 43 47 43 41 41 40 40 40 41 43 40 43 41 31 31 41 36 37 27 23 11 11 11 12 12 19 20 11 11 10 10 11 20 19 32 35 29 29 28 25 25 28 22 22 18 18 23 19 15 8 8 8 8 13 15 21 13 13 13 18 27 31 29 32 32 26 29 22 22 13 13 11 21 15 20 21 14 17 17 22 18 13 10 10 10 10 9 8 8 8 9 9 15 12 12 12 13 12 16 17 20 10 8 8 6 6 9 9 9 9 12 15 15 7 7 6 8 8 8 8 8 8 8 10 10 8 8 9 9 8 8 8 8 8 8 10 10 9 9 9 16 11 13 13 11 10 8 9 8 10 10 8 8 8 9 11 11 11 11 11 11 11 16 12 10 10 8 10 8 8 8 6 9 9 9 10 8 8 8 10 10 10 11 11 9 9 9 16 9 8 8 8 8 8 17 7 7 7 8 13 17 21 11 8 8 8 8 8 8 8 9 9 10 10 9 9 10 9 8 8 8 8 8 9 18 19 11 11 11 10 7 6 6 6 8 8 8 7 8 8 7 7 12 10 6 6 6 6 7 8 11 12 9 9 11 11 11 10 11 9 9 9 9 9 9 8 8 9 9 9 10 12 11 11 18 13 17 12 9 9 8 8 8 10 13 10 10 8 6 6 7 6 8 8 10 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no340_k21.g1 MSMg01no340_k21.g1 CHROMAT_FILE:
MSMg01no340_k21.g1 PHD_FILE: MSMg01no340_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:44 2005
         (426 letters)



>mm_chr14_73729636_73730459
          Length = 824

 Score =  768 bits (397), Expect = 0.0
 Identities = 419/427 (98%), Gaps = 4/427 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgtgtagcccattgtctcaaattcctggcagtcctcctgcctcagcctcccaagtgct 60
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 actgtgtagcccattgtctcaaattcctggcagccctcctgcctcagcctcccaagtgct 260

                                                                       
Query: 61  ggaattatgcccagtttaacagtttgtttttatttcactttccaaaagttcaagacaatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaattatgcccagtttaacagtttgtttttatttcactttccaaaagttcaagacaatt 320

                                                                       
Query: 121 ggaaggtttaaaggaatgaacagtttctgtgcagagagtatgggaaacaactggcctctg 180
           ||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||
Sbjct: 321 ggaaggtttaaaggaatgaacagtttctgtgc--agagtatgggaaacaactgacctctg 378

                                                                       
Query: 181 aagaacttctgctctctgcggtggactcaggatcaggactcacgtcccttatgtgtgtac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 aagaacttctgctctctgcggtggactcaggatcaggactcacgtcccttatgtgtgtac 438

                                                                       
Query: 241 ttcttagattctttcaggttttgggaaaggagacctgctactcttatctccgttactaaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttcttagattctttcaggttttgggaaaggagacctgctactcttatctccgttactaaa 498

                                                                       
Query: 301 ag-ctggtgatgagctgggatagggtaaagggacaagagcaagggcacaggagccctctc 359
            | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 -gactggtgatgagctgggatagggtaaagggacaagagcaagggcacaggagccctctc 557

                                                                       
Query: 360 tgcgtcctcctgtactcctgtgatgacagcgagtgctcagccaatccccccaccccttcc 419
           || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tgtgtcttcctgtactcctgtgatgacagcgagtgctcagccaatccccccaccccttcc 617

                  
Query: 420 tccccgt 426
           |||||||
Sbjct: 618 tccccgt 624


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 824
Length adjustment: 9
Effective length of query: 417
Effective length of database: 815
Effective search space:   339855
Effective search space used:   339855
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information