Query= MSMg01no342_a08.b1 MSMg01no342_a08.b1 CHROMAT_FILE:
MSMg01no342_a08.b1 PHD_FILE: MSMg01no342_a08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:25 2005
(516 letters)
>mm_chr14_112912649_112913564
Length = 916
Score = 953 bits (493), Expect = 0.0
Identities = 509/515 (98%), Gaps = 3/515 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcctttccc-tttgtatctccttgatctccttttgttgtcttattgctctgac 63
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gaattcttcctttccaatttgtatctccttgatctccttttgttgtcttattgctctgac 261
Query: 64 taggacttcaagtagcatattgaataagtagggaaagagtgggcaatcttgtagatgttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 taggacttcaagtagcatattgaataagtagggaaagagtgggcaatcttgtagatgttt 321
Query: 124 agatgtgtgtatttagatgtcataaatgaagaacgtggggatataagcaaagcatctata 183
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agatgtgtatatttagatgtcataaatgaagaacgtggggatataagcaaagcatctata 381
Query: 184 tccatgcaaggaaatacacactcatgacaataaaattttccttgttaattaata--atta 241
||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 382 tccatgcaaggaaatacacacacatgacaataaaattttccttgttaattaatatgatta 441
Query: 242 ttaaaattgtgaccatgtaagccaaaaataaatatgatgtgacaaaaccaggatagaagc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ttaaaattgtgaccatgtaagccaaaaataaatatgatgtgacaaaaccaggatagaagc 501
Query: 302 catgtgaattccattaacatttcatataacaacaactgaaatacttttagccttctcatt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 catgtgaattccattaacatttcatataacaacaactgaaatacttttagccttctcatt 561
Query: 362 aacagtaagaatgccacttatcaaaattatatctaaaaacatgtatattttcataaatag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aacagtaagaatgccacttatcaaaattatatctaaaaacatgtatattttcataaatag 621
Query: 422 tctcacttatcttattgagatcaacagaaaggaaaatcaagatagcacatccagccacta 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tctcacttatcttattgagatcaacagaaaggaaaatcaagatagcacatccagccacta 681
Query: 482 attttcactgtggttaatttttgaaaccattaatg 516
|||||||||||||||||||||||||||||||||||
Sbjct: 682 attttcactgtggttaatttttgaaaccattaatg 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_a08.g1 MSMg01no342_a08.g1 CHROMAT_FILE:
MSMg01no342_a08.g1 PHD_FILE: MSMg01no342_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:26 2005
(555 letters)
>mm_chr14_113070681_113071633
Length = 953
Score = 1054 bits (545), Expect = 0.0
Identities = 552/555 (99%), Gaps = 2/555 (0%)
Strand = Plus / Minus
Query: 1 tatagagaatattggtaatgtatttctctttctcaggtgtagtatgagaagaaagaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tatagagaatattggtaatgtatttctctttctcaggtgtagtatgagaagaaagaagaa 694
Query: 61 agtgtggatcagtttgcttgaaatgtgactttccacagacactgtccatcacagatacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 agtgtggatcagtttgcttgaaatgtgactttccacagacactgtccatcacagatacaa 634
Query: 121 tagcaaagaggagaaatgatcaaatgtatttctatttcctttgcttagttttgaacattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 633 tagcaaagaggagaaatgatcaaatgtatttctatttcctttgcttagttttgaagattt 574
Query: 181 tccatcttgtagagatttcaaacatctttaaaataaagaaaaacatatattcttatccag 240
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 573 tccatcttgtagagatttcaaacatctttaaaataaagaaaaac--atattcttatccag 516
Query: 241 aaatcttttactgccagaaatgaaaaaaataataataattgtttttaaccaaagtatact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aaatcttttactgccagaaatgaaaaaaataataataattgtttttaaccaaagtatact 456
Query: 301 tagtaaaactttcaggaaatgaacatccagtggttgcaggttttcatgagacccttatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tagtaaaactttcaggaaatgaacatccagtggttgcaggttttcatgagacccttatta 396
Query: 361 atatataagatctaatatatctagtctttctattttatggtgaaagcttaacaatattat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atatataagatctaatatatctagtctttctattttatggtgaaagcttaacaatattat 336
Query: 421 tatttcatataaatatttaggaaaatttgtttatccagtgactgtaatcaaataagtcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tatttcatataaatatttaggaaaatttgtttatccagtgactgtaatcaaataagtcct 276
Query: 481 acaagaaccagaaattcatcatgctaacacagtctggagatactgaaaattactttgaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 acaagaaccagaaattcatcatgctaacacagtctggagatactgaaaattactttgaga 216
Query: 541 gataatttaatataa 555
|||||||||||||||
Sbjct: 215 gataatttaatataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 953
Length adjustment: 10
Effective length of query: 545
Effective length of database: 943
Effective search space: 513935
Effective search space used: 513935
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
