Query= MSMg01no342_d08.b1 MSMg01no342_d08.b1 CHROMAT_FILE:
MSMg01no342_d08.b1 PHD_FILE: MSMg01no342_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:40 2005
(421 letters)
>mm_chr14_28443916_28444735
Length = 820
Score = 710 bits (367), Expect = 0.0
Identities = 396/413 (95%), Gaps = 13/413 (3%)
Strand = Plus / Minus
Query: 21 aacttagagcagcaaagcacagcgaggtttagtttcttatgaaaccctgctctctcttgc 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aacttagagcagcaaagcacagcgaggtttagtttcttatgaaaccctgctctctcttgc 456
Query: 81 tataattagtcatgccattttagcagaaatgtctctcctagtttgcataaggatatgaga 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tataattagtcatgccattttagcagaaatgtctctcctagtttgcataaggatatgaga 396
Query: 141 gtattcttacaaaacagtcaaactgctcgacgcccattcaagctcttgtcttctgaccca 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 gtattcttacaaaacagtcaaactgctcgacgcccattcaagctcttgtcttctgaccca 336
Query: 201 ctacgaagttatcttgaattaatagttcgttcctcaagcatttgaggggaatgtactttg 260
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 335 ctacgaagttatcttgaattaatagtttgttcctcaagcatttgaggggaatgtactttg 276
Query: 261 gtgcctgcagttcattcatactcaaaactgtgtaggggcggagagcaggaaggcaa---- 316
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 275 gtgcctgcagttcattcatactcaaaaccgtgtaggggcggagagcag-aaggcaagaaa 217
Query: 317 --------ttttagacacttgcgtgtgttcgcatacacatgcacatacacacacatgcac 368
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 216 agaggtaattttagacacttgcgtgtgttcgcacacacatgcacatacacacacatgcac 157
Query: 369 acacaaacacacacccacacctacatatgcacatgcaaccacacatatcacac 421
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 156 acacaaacacacacccacacctacatatgcacacgcaaccacacatatcacac 104
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 820
Length adjustment: 9
Effective length of query: 412
Effective length of database: 811
Effective search space: 334132
Effective search space used: 334132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_d08.g1 MSMg01no342_d08.g1 CHROMAT_FILE:
MSMg01no342_d08.g1 PHD_FILE: MSMg01no342_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:40 2005
(445 letters)
>mm_chr14_28243465_28244309
Length = 845
Score = 861 bits (445), Expect = 0.0
Identities = 445/445 (100%)
Strand = Plus / Plus
Query: 1 acttgatgtcgttaaggtgtgtatggctgtgctgatacaagaaaagttagatactcatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttgatgtcgttaaggtgtgtatggctgtgctgatacaagaaaagttagatactcatcc 260
Query: 61 ccaaccgccagttggtagaaaaggtgagaagtacttttaagtagggcctcataatgtagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaaccgccagttggtagaaaaggtgagaagtacttttaagtagggcctcataatgtagt 320
Query: 121 aagggcttaacagtttcaagctgtatcaaacctttttgacatcctattttggattttaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagggcttaacagtttcaagctgtatcaaacctttttgacatcctattttggattttaaa 380
Query: 181 tgactaaggctttgaacaaatcattaaaacaagactttaaaaagggaccagaaaactggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgactaaggctttgaacaaatcattaaaacaagactttaaaaagggaccagaaaactggc 440
Query: 241 ttagagtcctttaggattctgtttgaaaatttagtaaggtagtatgtacttcttaaattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttagagtcctttaggattctgtttgaaaatttagtaaggtagtatgtacttcttaaattt 500
Query: 301 cataagccaaatccagaagttgctctaaaatgactgcccttgaacatactaaaagtggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cataagccaaatccagaagttgctctaaaatgactgcccttgaacatactaaaagtggca 560
Query: 361 cagggaattagggagtataaaccttagctgctttttccgtggagtctgatgtattccttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagggaattagggagtataaaccttagctgctttttccgtggagtctgatgtattccttg 620
Query: 421 ggggaaatgagatagtttccatttt 445
|||||||||||||||||||||||||
Sbjct: 621 ggggaaatgagatagtttccatttt 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
