Query= MSMg01no343_f11.b1 MSMg01no343_f11.b1 CHROMAT_FILE:
MSMg01no343_f11.b1 PHD_FILE: MSMg01no343_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:08 2005
(367 letters)
>mm_chr14_13719572_13720337
Length = 766
Score = 656 bits (339), Expect = 0.0
Identities = 357/363 (98%), Gaps = 1/363 (0%)
Strand = Plus / Minus
Query: 5 gaattctatcccttgtcgcttggtaggactgaaatagaattttgagtacctgccctctgc 64
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gaattctatcccaagttgcttggtaggactgaaatagaattttgagtacctgccctctgc 507
Query: 65 aaatttagacttggaagctttaatcctccatgaaataggaggatgtggggatggggcaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaatttagacttggaagctttaatcctccatgaaataggaggatgtggggatggggcaac 447
Query: 125 catggtgggatcagtgccatgataggaagaaaccaaaaatattttatcacccttaatccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 catggtgggatcagtgccatgataggaagaaaccaaaaatattttatcacccttaatccc 387
Query: 185 atcataaagtaacctgagaaagcctaactcttgggtgatttttactatattaacaaaata 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atcataaagtaacctgagaaagcctaactcttgggtgatttttactatattaacaaaata 327
Query: 245 cagaagtgaaaacatgtgagatgagaagtagataccattaaaaattatggagtcaacaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cagaagtgaaaacatgtgagatgagaagtagataccattaaaaattatggagtcaacaca 267
Query: 305 aaaacatagaagccatgacatgtatgcagcatagtgacagagaagtcatgatatggagtc 364
|||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 266 aaaa-atagaagccatgacatggaggcagcatagtgacagagaagtcatgatatggagtc 208
Query: 365 agc 367
|||
Sbjct: 207 agc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 766
Length adjustment: 9
Effective length of query: 358
Effective length of database: 757
Effective search space: 271006
Effective search space used: 271006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_f11.g1 MSMg01no343_f11.g1 CHROMAT_FILE:
MSMg01no343_f11.g1 PHD_FILE: MSMg01no343_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:08 2005
(401 letters)
>mm_chr14_13558705_13559505
Length = 801
Score = 735 bits (380), Expect = 0.0
Identities = 395/400 (98%)
Strand = Plus / Plus
Query: 1 tttccttgctgcagccatatacatgatttattgctgcccttgtcatgctaaggcaaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttccttgctgcagccatatacatgatttattgctgcccttgtcatgctaaggcaaaact 260
Query: 61 aactttcttcactgctgcttctgcaccatcattgaaactggcagtgtctcatcaatgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactttcttcactgctgcttctgcaccatcattgaaactggcagtgtctcatcaatgtta 320
Query: 121 acagaattaccttgaagatcttggtgggcatggctatacgtcatgtacctgtgactagtg 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 acagaattaccttgaagatcttggtgggcatggctatatgtcatgtacctgtgactagtg 380
Query: 181 aagtgaacagatgctgtatggtacttaggaaaagtggggaaggatgtgatcatggagggc 240
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 381 aagtgaacagatgctgtatggtacttatgaagagtggggaaggatgtgatcatggagggc 440
Query: 241 agggtactagcacacagtgaacaggaaatggaacatgatggcacagaccatacatgccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agggtactagcacacagtgaacaggaaatggaacatgatggcacagaccatacatgccaa 500
Query: 301 agtgaaggtttaattcctaattcattgagaagtcattgacatacaacgaacaagagtagg 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 agtgaaggtttaattcctaattcattgagaagtcattgacatacaccgaacaagagtagg 560
Query: 361 catgatttgagcaccctgagagtcaatgtgcaaagaggac 400
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 561 catgatttgagcgccctgagagtcaatgtgcaaagaggac 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
