GCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATTGTTTTCCATAGATGAGTAGTACTCCATTGTGTAATGTAG
CACATTCACAACTGAATTGTCAAGATATTAGAGAGATGAACTTCTCCACA
TCTCCTTTACACTTTCATTCATTTATCCTTCTTTTGAGACTAATAGGACA
GAATGAGACACTGTTTTACATACACAATCCTTTCAAGAGGAGAGCTTACT
AAATATTTACTCTGGGAGCCTCAAAACCATCATTGATTCTTCCATATTGC
TCCTCATAATTTTCATAAACTTTCTGCTTCTGGGTGGTGGTAGATATGAT
GCAGACATAGTTCTAATTATTTGAAATCTATTATCTTTCTTATAAAAATG
AACTCAGTAATCTTTGGGAAATGTTGGTGCCTGTATGATAATAAAGGATC
AGGAATAGTGATGTGGGTAGAAATTCTGGAAAGCCAAGTCATACTCAGAA
TATCAGAGTAATTAATTATTCTACTGTAGACAAACTGACTGAATCTCTGA
GGTTTAATACCATCCACCGGGAAACCTAGGTTGATCTTTGTTGGTGCAAG
CAGCACTTCCGTGTGATGCTAGACCCCATTACAGCAGTCTGTTCCAAAAG
AACCTAAAGTTTGAGAGCAATGTACCAGGAAATCCTTTCTATTTATCTCT
AGCCCCACGGGTGTTATGACCCACACAN

ATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAGTCTTTTATCATGAATG
AATGTTGGATCTTGTCGAATGCTTTTTCTGCATCTAACTAGATGATTATG
TGGTTTTTGGTCCTTGAGTTTGTTAATATAATGGATTACATTGTTGGATT
TTCGTATATTAGACCATCCCTGCATCTCTTGGAATAAAACCTACTTGGTC
AGGATGGATGATTGCTTGAATGTGTTCTTGGATTCGGTTAGCGAGAATTT
GATTGAAGATTTTTGCATCGCTATTCATAGGGGACGATTGGGCTGAAGTT
CTTTATCTTTGTTGGGATATAGGACTGTTTAGATCCTTAGCCTGCTCTTG
ATTTAACTTTGGTACCTGGTATCTGTCTAGAAGCTTGTCCATTTCATCCA
AGTTCTCCTGTTTTATTGAGTATAGCCTTTGTAGAAGGATCTGATGGTGT
TTTGCGATTCGTTCAGGAGCTCGTGTTACGTCCGCCTTTTCGTTAGTGAT
TCGGTTAATTACGAGTTTTGTCGCTGTGCCGTCTAGCCGGTCTAGCTAAG
GGTTTCTGTATCTTGTCGATTCTCTAGCGCACCAATTCTGATTTTGGTGA
ACTCTTGAATACGTCTTCGTGTATCGACTTGGTAGATTTCACCCCTCGAT
TTGACTCGTTCTTCGCAATN

Query= MSMg01no344_a03.b1 MSMg01no344_a03.b1 CHROMAT_FILE:
MSMg01no344_a03.b1 PHD_FILE: MSMg01no344_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:04 2005
         (623 letters)



>mm_chr14_109588398_109589420
          Length = 1023

 Score = 1112 bits (575), Expect = 0.0
 Identities = 604/619 (97%), Gaps = 9/619 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattgttttccatagatgagtagtactccattgtgtaatgtagcacattcacaac 64
           |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 205 gaattcattgtttttcatagatgagtagtactccattgtgtaatgtaacacattcacaac 264

                                                                       
Query: 65  tgaattgtcaagatattagagagatgaacttctccacatctcctttacactttcattcat 124
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 tgaattgtcaagatattagagagatgaacttctccacgtctcctttacactttcattcat 324

                                                                       
Query: 125 ttatccttcttttgagactaataggacagaatgagacactgttttacatacacaatcctt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttatccttcttttgagactaataggacagaatgagacactgttttacatacacaatcctt 384

                                                                       
Query: 185 tcaagaggagagcttactaaatatttactctgggagcctcaaaaccatcattgattcttc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcaagaggagagcttactaaatatttactctgggagcctcaaaaccatcattgattcttc 444

                                                                       
Query: 245 catattgctcctcataattttcataaactttctgcttctgggtggtggtagatatgatgc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catattgctcctcataattttcataaactttctgcttctgggtggtggtagatatgatgc 504

                                                                       
Query: 305 agacatagttctaattatttgaaatctattatctttcttataaaaatgaactcagtaatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 505 agacatagttctaattatttgaaatctattatctttcttataaaaatgaactcagtattc 564

                                                                       
Query: 365 tttgggaaatgttggtgcctgtatgataataaaggatcaggaatagtgatgtgggtagaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttgggaaatgttggtgcctgtatgataataaaggatcaggaatagtgatgtgggtagaa 624

                                                                       
Query: 425 attctggaaagccaagtcatactcagaatatcagagtaattaattattctactgtagaca 484
           |         |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 625 a---------gccaagtcatactcagaatatcagagtaattatttattctactgtagaca 675

                                                                       
Query: 485 aactgactgaatctctgaggtttaataccatccaccgggaaacctaggttgatctttgtt 544
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 676 aactgactgaatctctgaggtttaataccatccaccaggaaacctaggttgatctttgtt 735

                                                                       
Query: 545 ggtgcaagcagcacttccgtgtgatgctagaccccattacagcagtctgttccaaaagaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ggtgcaagcagcacttccgtgtgatgctagaccccattacagcagtctgttccaaaagaa 795

                              
Query: 605 cctaaagtttgagagcaat 623
           |||||||||||||||||||
Sbjct: 796 cctaaagtttgagagcaat 814


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space:   620969
Effective search space used:   620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)