Query= MSMg01no346_e12.b1 MSMg01no346_e12.b1 CHROMAT_FILE:
MSMg01no346_e12.b1 PHD_FILE: MSMg01no346_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:56 2005
(423 letters)
>mm_chr14_27303727_27304549
Length = 823
Score = 795 bits (411), Expect = 0.0
Identities = 420/423 (99%)
Strand = Plus / Minus
Query: 1 gagcaggtcattattagaagtttgaagtgactgtaagtttgtactagctatgtatatcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 623 gagcaggtcattattagaagtttgaagtgactgtaagtttgtactagctatgtatgtcat 564
Query: 61 ttccaggcataaatactaaaaagttaaaccagaatccatttgttgttacatttcctaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttccaggcataaatactaaaaagttaaaccagaatccatttgttgttacatttcctaatg 504
Query: 121 atatattaaaagtattcccctccatttctttatacagtaagttctaatgctaaaagaggt 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 503 atatattaaaagtattcccctccatttctttatacaataagttctaatgctaaaagaggt 444
Query: 181 tttgtgaataactgttctttcctgatagggctgcctgttcttgtctttctggtgttaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tttgtgaataactgttctttcctgatagggctgcctgttcttgtctttctggtgttaagg 384
Query: 241 gatgtaaattttgtatagatttgtaaaatatcaacagaatttaatgacctgtaattaaat 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gatgtaaattttggatagatttgtaaaatatcaacagaatttaatgacctgtaattaaat 324
Query: 301 gtatgaattgctagacaaagtcagcagttgttttgtgttgaaattttaaacaataaatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtatgaattgctagacaaagtcagcagttgttttgtgttgaaattttaaacaataaatca 264
Query: 361 tttacagatagtatagtagcctttaaattgttacctgggaataaatgaaatgaactgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tttacagatagtatagtagcctttaaattgttacctgggaataaatgaaatgaactgtca 204
Query: 421 ttt 423
|||
Sbjct: 203 ttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no346_e12.g1 MSMg01no346_e12.g1 CHROMAT_FILE:
MSMg01no346_e12.g1 PHD_FILE: MSMg01no346_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:36:56 2005
(504 letters)
>mm_chr14_27133382_27134287
Length = 906
Score = 853 bits (441), Expect = 0.0
Identities = 493/515 (95%), Gaps = 12/515 (2%)
Strand = Plus / Plus
Query: 1 aagtagaggcatttgtccctcccctgattggctaagagaaaagtgtcacccttgtcatac 60
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 193 aagtagaggcatttgtccctcccctgattggctaggagaaaagtgtcatccttgtcatac 252
Query: 61 aggcagagcaatggccttaataagattctagctctgattagtgaggggctgagagaaggt 120
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 253 aggcagagcaatggccttaataagattctagccctgattagtgaggggctgagagaaggg 312
Query: 121 tggctggaggggccgagcaggagtaccattcactcgcgccctctgc------g-gacagt 173
|||||| ||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 313 tggctgtaggggccgagcaggagtaccattcactcgcgccctctgcccctctgcgacagt 372
Query: 174 ggcagtagagagtgagcagcaggtgaggctgcatcttcatcagtgacagctcaggtcctg 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggcagtagagagtgagcagcaggtgaggctgcatcttcatcagtgacagctcaggtcctg 432
Query: 234 ttccctggccagaagctggagcagcagctctgccttggcgcttcctgcctc---atccag 290
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 433 ttccctggccagaagctggagcagcagctctgccttggcgcttcctgcctcctcatccag 492
Query: 291 tagctgttgccccaggctcagtgccttcagggccacgacctaggttttatgctgaggttc 350
||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||
Sbjct: 493 tagctgttgccccaggctcagtgccctcggggccacgacctaggtttcatgctgaggttc 552
Query: 351 cataatggctagcctgccccatcccacctagctt-tgtgggataatcgccaaaactctct 409
||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||||
Sbjct: 553 cataatggctagcctgccccatcccacctag-ttctgtgggataatagccaaaactctct 611
Query: 410 gagacatcctgcataccgagcttggcagcagcctaggacactgtagtcaagaggtggcag 469
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gagacatcctgcatactgagcttggcagcagcctaggacactgtagtcaagaggtggcag 671
Query: 470 ggctcacaatgagagcaacagagggagatattcta 504
|||||||||||||||||||||||||||||||||||
Sbjct: 672 ggctcacaatgagagcaacagagggagatattcta 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 906
Length adjustment: 10
Effective length of query: 494
Effective length of database: 896
Effective search space: 442624
Effective search space used: 442624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|