Query= MSMg01no347_i02.b1 MSMg01no347_i02.b1 CHROMAT_FILE:
MSMg01no347_i02.b1 PHD_FILE: MSMg01no347_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:30 2005
(508 letters)
>mm_chr14_23157206_23158112
Length = 907
Score = 915 bits (473), Expect = 0.0
Identities = 497/505 (98%), Gaps = 1/505 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctattattctgtcccagtcagggaacattagagacagaaacaatgaaaaagac 63
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ggaattcctattaaagtgtcccagtcagggaacattagagacagaaacaatgaaaaagac 648
Query: 64 aatagagtgctgagccaccaagcataggatagagccaaaatatgtgggagcagctcaagt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 aatagagtgctgagccaccaagcataggatagagccaaaatatgtgggagcagctcaagt 588
Query: 124 ctctggaccctgagctagggagggctaccagcaccaagctggtggtttaaaatatactca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ctctggaccctgagctagggagggctaccagcaccaagctggtggtttaaaatatactca 528
Query: 184 cggagactatagacaaatctaaaggggtctctgtcacattcccttggggaccacaaagtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 cggagactatagacaaatctaaaggggtctctgtcacattcccttggggaccacaaagtt 468
Query: 244 tacaccaagggtgacatattgaagttgcctcattttgtcttccacaaaataatggccaag 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 467 tacaccaagggtgacatattgaagttgccttattttgtcttccacaaaataatggccaag 408
Query: 304 gccatatgaggatcagctgtgtagactacatcatgtcactaggcaggctcttggtatatc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gccatatgaggatcagctgtgtagactacatcatgtcactaggcaggctcttggtatatc 348
Query: 364 ccaggtacccaagaacagagtatatgctgcaaatgttatgctagaaataggttcctgtct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ccaggtacccaagaacagagtatatgctgcaaatgttatgctagaaataggttcctgtct 288
Query: 424 gtaaagatggcgtattctaacagaatgagctctgtatgccataaagatgtatagagcaca 483
|||||||||| |||||||||||||||||| ||||||||| |||||||||| |||||||||
Sbjct: 287 gtaaagatggtgtattctaacagaatgagttctgtatgc-ataaagatgtgtagagcaca 229
Query: 484 cccaatgctcccagttaagggagag 508
|||||||||||||||||||||||||
Sbjct: 228 cccaatgctcccagttaagggagag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 907
Length adjustment: 10
Effective length of query: 498
Effective length of database: 897
Effective search space: 446706
Effective search space used: 446706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_i02.g1 MSMg01no347_i02.g1 CHROMAT_FILE:
MSMg01no347_i02.g1 PHD_FILE: MSMg01no347_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:30 2005
(515 letters)
>mm_chr14_23048647_23049561
Length = 915
Score = 911 bits (471), Expect = 0.0
Identities = 504/515 (97%)
Strand = Plus / Plus
Query: 1 attggtttctatgggaattatgccagtatcccacgcaatgtggagtttggtctgtggcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attggtttctatgggaattatgccagtatcccacgcaatgtggagtttggtctgtggcag 260
Query: 61 agtgtgtcttcctttcttctccaaactgtgaatatttgttagtcatttaatttgtagacc 120
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 261 agtgtgtcttcctttcttctccaaactgtgaatatttgctagtcacttaatttgtagacc 320
Query: 121 aagatgagacttagatattctcggtttgcagataccctgaaagactggcagtggtggctt 180
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagacgcgacttagatattctcggtttgcagataccctgaaagactggcagtggtggctt 380
Query: 181 gttgaaattttcatctggtttagtttcctgagtctggaagggaagatgtttgggatagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttgaaattttcatctggtttagtttcctgagtctggaagggaagatgtttgggatagag 440
Query: 241 tgttcataacttttttgaagaatgtagctatagatgctctaggtacaaaagcatgcatag 300
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 441 tgttcataacttttttgaagaatgtagcgatagatgctgtaggtacaaaagcatgcatag 500
Query: 301 agataaataaaggtttaggaaattaagcccatctgtccttcatgggtcgtattttcagtg 360
|||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||
Sbjct: 501 agataaataaaggtttagaaaattaagtccatctgtccttcatgggtcatattttcagtg 560
Query: 361 atttcatccagggaagacacgatgaacaaaacccacagtatcttctatcctgtgcataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttcatccagggaagacacgatgaacaaaacccacagtatcttctatcctgtgcataga 620
Query: 421 ttagatacatgaaagatgtttatgggaacagagagtagtggtaccagccccatctgtatg 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 621 ttagatacatgaaagatgtttatgggaacagagagtagtggtaccagccccatctgtacg 680
Query: 481 tgcacacacccaaggcccacccaaagtctaccgtg 515
|||||||||||||||||||||||||| ||||||||
Sbjct: 681 tgcacacacccaaggcccacccaaagcctaccgtg 715
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
