Query= MSMg01no348_g24.b1 MSMg01no348_g24.b1 CHROMAT_FILE:
MSMg01no348_g24.b1 PHD_FILE: MSMg01no348_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:43 2005
(494 letters)
>mm_chr14_25728890_25729783
Length = 894
Score = 895 bits (463), Expect = 0.0
Identities = 484/491 (98%)
Strand = Plus / Plus
Query: 4 ggaattctaccacctcaaagaaataccgacttttttgcatcttgtagctccatcccccca 63
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctaccaccagaaagaaataccgacttttttgcatcttgtagctccatcccccca 263
Query: 64 ttgtggtcttgcagaccctcaggcccttgggatcaaggacccaatacagtgaggtggcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttgtggtcttgcagaccctcaggcccttgggatcaaggacccaatacagtgaggtggcaa 323
Query: 124 tgccccatgtgtcagagagtgctgtgtggacgaaggcagatcctggagccatctgggtct 183
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgccccatgggtcagagagtgctgtgtggacgaaggcagatcctggagccatctgggtct 383
Query: 184 gtttggggctatgtcctcacagagtagtaggatgtcctcttactgggctcctctgtcact 243
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 gtttggggctatgtcctcacagagtagtaggatgtcctcttactgagctcctctgtcact 443
Query: 244 ccagaagcttgggtacacagagagctctcccttgagagactggaaccttgtctcagagtc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccagaagcttgggtacacagagagctctcccttgagagactggaaccttgtctcagagtc 503
Query: 304 cctagatcaaccctagtgttgtcaaatctgttaataatttaaaccacactccaataaaaa 363
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 504 cctagatcaaccctagtgttgtcaaatctgttaataatttaaaccagactccaataaaaa 563
Query: 364 tatccaagactcaatactaccctgcaagcatccaaaggaagtcagctacctacagccttc 423
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tagccaagactcaatactaccctgcaagcatccaaaggaagtcagctacctacagccttc 623
Query: 424 agtcagctacctacagccttcagaaagcctcatctagacttccccgtgtgccaggtttga 483
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 624 agtcagctacctacagccttcagaaagcctcatctagacttccctgtgtgccaggtttga 683
Query: 484 tgtttgcctcc 494
|||||||||||
Sbjct: 684 tgtttgcctcc 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_g24.g1 MSMg01no348_g24.g1 CHROMAT_FILE:
MSMg01no348_g24.g1 PHD_FILE: MSMg01no348_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:44 2005
(422 letters)
>mm_chr14_25930520_25931341
Length = 822
Score = 772 bits (399), Expect = 0.0
Identities = 414/423 (97%), Gaps = 8/423 (1%)
Strand = Plus / Minus
Query: 1 tcctctctgctgggctcttgcaggcacatgtcactgtatctagcttttatatggggtctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tcctctctgctgggctcttgcaggcacatgtcactgtatctagcttttatatggggtctg 398
Query: 61 aggctgaaactcagtccttcacacttgtatggaggttccttacagattgctccattacac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aggctgaaactcagtccttcacacttgtatggaggttccttacagattgctccattacac 338
Query: 121 tggactcccctttccattttagagaaatggatgtaggctcgatgagaagaggcaatgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tggactcccctttccattttagagaaatggatgtaggctcgatgagaagaggcaatgtac 278
Query: 181 taacgttcttaccggactcaggaattgttctggttctagagaagcgggctccttccagct 240
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 277 taaagttcttaccggactcaggaattgttctggttctagagaagcgggctc-------ct 225
Query: 241 tccagcttccagcttccagcttcccctcgcacaagtgacacttttcttggatgtttagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tccagcttccagcttccagcttcccctcgcacaagtgacacttttcttggatgtttagac 165
Query: 301 ccagcatgataaagtgttttattgtggaatcattatgacttggtaatcctaggaaactcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ccagcatgataaagtgttttattgtggaatcattatgacttggtaatcctaggaaactcc 105
Query: 361 ctaagacttctgtctcctcggtggtctgggaagatgttgtttgctgaagag-aaaaagta 419
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 104 ctaagacttctgtctcctcggtggtctgggaagatgttgtttgctgaagagaaaaaagta 45
Query: 420 agc 422
|||
Sbjct: 44 agc 42
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
